Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RPS20P14-201ENST00000412545 360 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 FAR2P2-201ENST00000413041 594 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC009480.2-201ENST00000422916 432 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 PDSS1P1-201ENST00000422953 1114 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 FAR2P4-202ENST00000425399 584 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC073508.1-201ENST00000428866 656 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC068287.1-201ENST00000430283 295 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 MRPL35P4-201ENST00000453682 566 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AL035407.2-201ENST00000454090 378 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC021146.3-201ENST00000511911 260 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC015795.1-201ENST00000513669 327 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 RN7SKP234-201ENST00000517173 224 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC012254.4-201ENST00000588843 273 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 RPL12P25-202ENST00000598100 674 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 ZNF92P2-201ENST00000600543 1059 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 LLPHP1-201ENST00000603571 367 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AC079587.1-201ENST00000603846 277 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AP006248.3-201ENST00000623580 594 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AL590396.2-201ENST00000636511 1041 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AL596275.2-204ENST00000641628 552 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 AL596275.2-206ENST00000641957 626 ntBASIC4.45□□□□□ -1.7
HLA-DPA1P20036 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPA1P20036 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 SEC63P2-201ENST00000503863 1939 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 RNU6-1293P-201ENST00000384077 107 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC136624.1-201ENST00000400791 413 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 HDGFP1-201ENST00000405943 252 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AL603766.1-201ENST00000407763 664 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AL356387.2-201ENST00000422272 243 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AL132765.1-201ENST00000434165 553 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 DHFRP3-201ENST00000455595 559 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 SNORD108-201ENST00000459332 71 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 RPL21P126-201ENST00000470049 478 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC073522.1-201ENST00000483312 377 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 RNU6-1102P-201ENST00000516149 96 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 RN7SKP96-201ENST00000516948 297 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 HIGD1AP5-201ENST00000529959 259 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC100770.1-201ENST00000532310 322 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 MIR5096-201ENST00000583713 70 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 MIR4715-201ENST00000584117 79 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC007390.2-201ENST00000606229 3803 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AC091979.2-201ENST00000607514 214 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 AL138721.1-201ENST00000616756 179 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 RNU6-156P-201ENST00000621869 107 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 MIR7641-1-201ENST00000627518 61 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 EIF2AP4-201ENST00000424793 1781 ntBASIC4.44□□□□□ -1.7
HLA-DPA1P20036 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HLA-DPA1P20036 DCAF13P1-201ENST00000495256 1330 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms