Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 MTND4LP7-201ENST00000431728 294 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC006326.1-201ENST00000445465 787 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC008083.2-201ENST00000546707 476 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 NOP56P3-201ENST00000549457 385 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 GLRXP2-201ENST00000555594 321 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC068714.1-201ENST00000559623 800 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AL731537.2-201ENST00000561565 951 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AL020997.2-201ENST00000602607 184 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 AC011472.4-201ENST00000615848 491 ntBASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCF1Q9UBD9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.71□□□□□ -1.81
CLCF1Q9UBD9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.81
CLCF1Q9UBD9 AC116667.1-201ENST00000604855 2072 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 OR11H4-201ENST00000315409 1082 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 SNORD51.1-201ENST00000365405 77 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 RNU6-178P-201ENST00000384631 104 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 RNA5SP372-201ENST00000390836 115 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 RPL21P65-201ENST00000406094 466 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC048351.1-201ENST00000420064 602 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 RPL17P36-201ENST00000420302 549 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 OR2X1P-201ENST00000421144 687 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AL117339.2-201ENST00000430475 180 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 ZNF965P-201ENST00000432501 817 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 XKRY2-201ENST00000442362 1093 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC026402.1-201ENST00000513642 170 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC108064.1-201ENST00000513791 460 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 RNU6-1004P-201ENST00000516584 111 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC022884.3-201ENST00000579571 248 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC005242.1-201ENST00000585658 438 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AC015849.2-201ENST00000605738 409 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AL021368.1-201ENST00000607490 540 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AL355802.4-201ENST00000607635 548 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 AL356490.1-201ENST00000623079 479 ntBASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLCF1Q9UBD9 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC068254.2-201ENST00000623938 3577 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 RNU6-304P-201ENST00000364855 107 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 RNA5SP283-201ENST00000365604 119 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 RNU4-31P-201ENST00000384211 141 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 MIR708-201ENST00000390708 88 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC093719.1-202ENST00000392735 373 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 TPT1P2-201ENST00000413105 503 ntBASIC3.7□□□□□ -1.82
CLCF1Q9UBD9 AC099336.2-201ENST00000422457 254 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms