Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC107905.1-201ENST00000616204 426 ntBASIC4.31□□□□□ -1.72
NXF3Q9H4D5 AL669942.2-201ENST00000620352 697 ntBASIC4.31□□□□□ -1.72
NXF3Q9H4D5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.31□□□□□ -1.72
NXF3Q9H4D5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NXF3Q9H4D5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NXF3Q9H4D5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 CYP1D1P-201ENST00000416662 1433 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 BX005019.1-201ENST00000561881 1810 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC011155.1-201ENST00000316512 456 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 Z97055.1-201ENST00000419730 712 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC099336.2-201ENST00000422457 254 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC099560.2-201ENST00000457554 255 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 RN7SL585P-201ENST00000470538 280 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 PPM1AP1-201ENST00000502740 1135 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 PPBPP1-201ENST00000510807 373 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 SNORA67.7-201ENST00000516664 135 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC022968.1-201ENST00000567372 442 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AL592494.3-201ENST00000609485 464 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC006133.1-201ENST00000617106 264 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC095038.2-201ENST00000621464 1070 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC039056.2-201ENST00000622261 511 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NXF3Q9H4D5 AC010329.2-201ENST00000595195 2737 ntBASIC4.3□□□□□ -1.72
NXF3Q9H4D5 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 RNA5SP124-201ENST00000362739 110 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 MIR30B-201ENST00000384850 88 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AL392003.1-201ENST00000434394 243 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 RPL5P30-201ENST00000465511 891 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AC105918.1-201ENST00000474399 838 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AC007688.1-201ENST00000475592 759 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 RN7SL323P-201ENST00000494712 295 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AL139099.1-201ENST00000497398 403 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 RNU6-551P-201ENST00000516661 103 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AC087369.1-201ENST00000520775 996 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 MIR4429-201ENST00000580105 73 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 MIR3158-1-201ENST00000583596 81 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 MTCO1P8-201ENST00000416914 1523 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AC006042.3-201ENST00000454684 1469 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 AP002001.2-201ENST00000529025 1469 ntBASIC4.29□□□□□ -1.72
NXF3Q9H4D5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.29□□□□□ -1.72
NXF3Q9H4D5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AL445437.1-201ENST00000623157 3087 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 MIR23B-201ENST00000384832 97 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 ATP5F1P3-201ENST00000397213 657 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 HIGD1AP4-201ENST00000430194 280 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 RPS20P1-201ENST00000434853 354 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AL500522.2-201ENST00000448562 343 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AC068446.3-201ENST00000555285 382 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 EIF1AXP2-201ENST00000555940 413 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AC074050.1-201ENST00000563247 211 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AC087499.8-201ENST00000578406 226 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 SNX6P1-201ENST00000601728 1224 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AC104662.1-201ENST00000604448 511 ntBASIC4.28□□□□□ -1.72
NXF3Q9H4D5 AC124312.6-202ENST00000623624 418 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms