Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 MTND2P11-201ENST00000423638 648 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 YWHAEP5-201ENST00000431545 765 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 RPL7P49-201ENST00000471402 708 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC090877.1-201ENST00000561418 344 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 RNU6-525P-201ENST00000363685 104 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 NACAP7-201ENST00000407371 609 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC008280.1-201ENST00000418851 412 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 Z97055.1-201ENST00000419730 712 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC092647.1-201ENST00000420654 287 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC091286.1-201ENST00000431233 461 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC096638.2-201ENST00000434965 711 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 YWHAQP9-201ENST00000445891 512 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC006499.5-201ENST00000505037 514 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 KCTD9P6-201ENST00000522306 950 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 CYCSP30-201ENST00000546447 172 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC7Q96M83 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC012468.1-201ENST00000604888 430 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 AC007179.3-201ENST00000604976 235 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC7Q96M83 AL591424.2-201ENST00000617023 128 ntBASIC5.42□□□□□ -1.54
CCDC7Q96M83 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC7Q96M83 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC7Q96M83 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC7Q96M83 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC233968.1-201ENST00000611212 1300 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 U8.11-201ENST00000384699 133 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 U8.12-201ENST00000384701 133 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 ATP5HP2-201ENST00000433885 485 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 U8.18-201ENST00000459285 133 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC084198.1-201ENST00000477747 402 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC138409.2-202ENST00000507274 458 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 SCARNA14-201ENST00000516903 136 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 NPM1P47-201ENST00000560843 856 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC087499.8-201ENST00000578406 226 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 AC019176.2-201ENST00000611579 315 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 MIR4727-201ENST00000622232 55 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 FP236240.3-201ENST00000623061 327 ntBASIC5.41□□□□□ -1.54
CCDC7Q96M83 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC7Q96M83 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC7Q96M83 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC7Q96M83 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC7Q96M83 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC7Q96M83 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC7Q96M83 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC7Q96M83 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.4□□□□□ -1.55
CCDC7Q96M83 RPS3AP6-201ENST00000484430 795 ntBASIC5.4□□□□□ -1.55
CCDC7Q96M83 RNA5SP208-201ENST00000516156 78 ntBASIC5.4□□□□□ -1.55
CCDC7Q96M83 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.4□□□□□ -1.55
CCDC7Q96M83 AP003392.5-201ENST00000607857 415 ntBASIC5.4□□□□□ -1.55
CCDC7Q96M83 AL391261.4-201ENST00000616012 481 ntBASIC5.4□□□□□ -1.55
CCDC7Q96M83 AC241377.1-201ENST00000619797 406 ntBASIC5.4□□□□□ -1.55
CCDC7Q96M83 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC7Q96M83 AP002001.2-201ENST00000529025 1469 ntBASIC5.39□□□□□ -1.55
CCDC7Q96M83 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC7Q96M83 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC7Q96M83 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC7Q96M83 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC7Q96M83 ZNF285B-201ENST00000561698 1767 ntBASIC5.39□□□□□ -1.55
CCDC7Q96M83 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC7Q96M83 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC7Q96M83 U1.1-201ENST00000384101 164 ntBASIC5.39□□□□□ -1.55
CCDC7Q96M83 SNORA5A-201ENST00000384111 134 ntBASIC5.39□□□□□ -1.55
CCDC7Q96M83 RPS24P12-201ENST00000402084 394 ntBASIC5.39□□□□□ -1.55
CCDC7Q96M83 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms