Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RN7SKP82-201ENST00000516786 223 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 IGKV2-38-201ENST00000517443 247 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 OR7E10P-201ENST00000526420 991 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AC105233.3-201ENST00000531125 744 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 OR4U1P-201ENST00000554958 912 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AC079171.1-201ENST00000568788 914 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 MIR4700-201ENST00000578311 74 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AP005212.4-201ENST00000614206 710 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 AP000346.3-201ENST00000622821 210 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 SYT14P1-202ENST00000600441 1448 ntBASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLHC1Q8NHS4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 RNU1-132P-201ENST00000364300 164 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 MIR585-201ENST00000384887 94 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 SNORA3C-201ENST00000408792 125 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 RPL23AP26-201ENST00000412728 464 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 CNOT7P1-201ENST00000429006 852 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 HMGB3P30-201ENST00000457863 606 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 USP9YP5-201ENST00000511770 630 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 KCTD9P2-201ENST00000512203 1013 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC008083.2-201ENST00000546707 476 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AGGF1P8-201ENST00000562979 1000 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC106785.3-201ENST00000564064 847 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC010615.3-201ENST00000597319 394 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC104785.1-201ENST00000603220 588 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AL451044.1-201ENST00000604867 238 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AP003117.2-201ENST00000606010 545 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 FAM27D1-201ENST00000612308 341 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AC233309.1-201ENST00000619522 751 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AL773545.4-201ENST00000637262 310 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 AL513478.4-201ENST00000641636 310 ntBASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLHC1Q8NHS4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC012618.3-205ENST00000637896 1496 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 SNORD35B-201ENST00000363660 87 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 MIR192-201ENST00000384915 110 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 U3.22-201ENST00000391120 215 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC011933.1-201ENST00000413334 321 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 JKAMPP1-201ENST00000413804 919 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC092647.1-201ENST00000420654 287 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 MTND2P11-201ENST00000423638 648 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AL138878.2-201ENST00000440581 1241 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC006011.1-201ENST00000442758 349 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 VN1R25P-201ENST00000443385 738 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 TXNP2-201ENST00000443918 295 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AL353898.1-201ENST00000444055 238 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 HMGB1P16-201ENST00000447155 540 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 EIF2S2P2-201ENST00000447161 982 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 RPL31P20-201ENST00000449593 360 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 Z95152.1-201ENST00000453556 656 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 VN1R40P-201ENST00000455196 941 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 RPS29P33-201ENST00000456717 146 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 snoU13.1-201ENST00000459157 104 ntBASIC3.93□□□□□ -1.78
CLHC1Q8NHS4 AC116533.1-201ENST00000459748 321 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms