Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM3P62310 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM3P62310 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM3P62310 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM3P62310 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM3P62310 RAD1P1-201ENST00000231383 813 ntBASIC3.28□□□□□ -1.88
LSM3P62310 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM3P62310 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM3P62310 RNU6-1279P-201ENST00000383917 103 ntBASIC3.28□□□□□ -1.88
LSM3P62310 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM3P62310 AC069213.2-201ENST00000420238 366 ntBASIC3.28□□□□□ -1.88
LSM3P62310 GLRXP1-201ENST00000423261 334 ntBASIC3.28□□□□□ -1.88
LSM3P62310 DPY19L1P2-201ENST00000426647 915 ntBASIC3.28□□□□□ -1.88
LSM3P62310 RPL23AP1-201ENST00000428990 471 ntBASIC3.28□□□□□ -1.88
LSM3P62310 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM3P62310 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.28□□□□□ -1.88
LSM3P62310 AC099563.1-201ENST00000456086 418 ntBASIC3.28□□□□□ -1.88
LSM3P62310 OR9M1P-201ENST00000459641 921 ntBASIC3.28□□□□□ -1.88
LSM3P62310 RPS23P7-201ENST00000466210 444 ntBASIC3.28□□□□□ -1.88
LSM3P62310 AC084357.1-201ENST00000473404 255 ntBASIC3.28□□□□□ -1.88
LSM3P62310 HMGB3P14-201ENST00000494195 599 ntBASIC3.28□□□□□ -1.88
LSM3P62310 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM3P62310 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM3P62310 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.28□□□□□ -1.88
LSM3P62310 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM3P62310 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM3P62310 AC068446.3-201ENST00000555285 382 ntBASIC3.28□□□□□ -1.88
LSM3P62310 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM3P62310 AL845331.3-202ENST00000562856 261 ntBASIC3.28□□□□□ -1.88
LSM3P62310 MIR5047-201ENST00000579212 100 ntBASIC3.28□□□□□ -1.88
LSM3P62310 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM3P62310 AC093765.1-201ENST00000603758 881 ntBASIC3.28□□□□□ -1.88
LSM3P62310 AL732372.2-225ENST00000642124 456 ntBASIC3.28□□□□□ -1.88
LSM3P62310 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LSM3P62310 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
LSM3P62310 AC090971.4-201ENST00000560291 1800 ntBASIC3.28□□□□□ -1.88
LSM3P62310 AC131971.1-201ENST00000332881 1482 ntBASIC3.28□□□□□ -1.88
LSM3P62310 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.28□□□□□ -1.89
LSM3P62310 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM3P62310 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM3P62310 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LSM3P62310 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
LSM3P62310 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM3P62310 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM3P62310 RNU1-75P-201ENST00000347264 129 ntBASIC3.27□□□□□ -1.89
LSM3P62310 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM3P62310 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM3P62310 MIR129-1-201ENST00000384972 72 ntBASIC3.27□□□□□ -1.89
LSM3P62310 MTCO3P31-201ENST00000405526 789 ntBASIC3.27□□□□□ -1.89
LSM3P62310 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM3P62310 AC011933.1-201ENST00000413334 321 ntBASIC3.27□□□□□ -1.89
LSM3P62310 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM3P62310 AL590139.1-201ENST00000416267 400 ntBASIC3.27□□□□□ -1.89
LSM3P62310 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM3P62310 AC099336.2-201ENST00000422457 254 ntBASIC3.27□□□□□ -1.89
LSM3P62310 MTND4LP13-201ENST00000425022 298 ntBASIC3.27□□□□□ -1.89
LSM3P62310 FAR1P1-201ENST00000427163 934 ntBASIC3.27□□□□□ -1.89
LSM3P62310 FHP1-201ENST00000442741 703 ntBASIC3.27□□□□□ -1.89
LSM3P62310 AC144530.1-201ENST00000452862 555 ntBASIC3.27□□□□□ -1.89
LSM3P62310 AC116533.1-201ENST00000459748 321 ntBASIC3.27□□□□□ -1.89
LSM3P62310 AC004453.1-201ENST00000487895 408 ntBASIC3.27□□□□□ -1.89
LSM3P62310 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM3P62310 AC108475.1-201ENST00000507880 950 ntBASIC3.27□□□□□ -1.89
LSM3P62310 FABP5P12-201ENST00000515543 389 ntBASIC3.27□□□□□ -1.89
LSM3P62310 RN7SKP289-201ENST00000517244 295 ntBASIC3.27□□□□□ -1.89
LSM3P62310 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM3P62310 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM3P62310 AP001922.4-201ENST00000526967 290 ntBASIC3.27□□□□□ -1.89
LSM3P62310 AC006518.1-201ENST00000541449 943 ntBASIC3.27□□□□□ -1.89
LSM3P62310 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM3P62310 SNORA62.6-201ENST00000606322 83 ntBASIC3.27□□□□□ -1.89
LSM3P62310 MIR6768-201ENST00000610734 72 ntBASIC3.27□□□□□ -1.89
LSM3P62310 AL445528.2-201ENST00000620582 470 ntBASIC3.27□□□□□ -1.89
LSM3P62310 AC018816.2-201ENST00000621460 353 ntBASIC3.27□□□□□ -1.89
LSM3P62310 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM3P62310 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM3P62310 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
LSM3P62310 AL137100.1-201ENST00000556703 1620 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AC068647.1-201ENST00000489539 2265 ntBASIC3.26□□□□□ -1.89
LSM3P62310 RN7SKP15-201ENST00000364742 309 ntBASIC3.26□□□□□ -1.89
LSM3P62310 HMGB3P18-201ENST00000406327 590 ntBASIC3.26□□□□□ -1.89
LSM3P62310 RNA5SP107-201ENST00000411358 122 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AL691447.1-201ENST00000419456 387 ntBASIC3.26□□□□□ -1.89
LSM3P62310 Z97055.1-201ENST00000419730 712 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM3P62310 AC073648.4-201ENST00000442655 781 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AC099063.2-201ENST00000446360 662 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AC006480.1-201ENST00000449887 378 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AC022431.1-201ENST00000450941 438 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM3P62310 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM3P62310 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.26□□□□□ -1.89
LSM3P62310 AP001636.2-201ENST00000525517 696 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AL121766.1-201ENST00000547436 487 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AC023161.2-201ENST00000551218 780 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AC068831.4-201ENST00000556118 109 ntBASIC3.26□□□□□ -1.89
LSM3P62310 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM3P62310 AC022149.2-201ENST00000621061 203 ntBASIC3.26□□□□□ -1.89
LSM3P62310 AC020978.9-201ENST00000624380 1141 ntBASIC3.26□□□□□ -1.89
LSM3P62310 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms