Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A1P12107 NAMPTP1-201ENST00000440465 2514 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A1P12107 MUC2-202ENST00000613187 4845 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL11A1P12107 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.26□□□□□ -1.73
COL11A1P12107 AC093535.2-201ENST00000624769 2326 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 USP8P1-201ENST00000494673 3183 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 AL355596.1-201ENST00000565399 3996 ntBASIC4.26□□□□□ -1.73
COL11A1P12107 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL11A1P12107 MIR634-201ENST00000385208 97 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.25□□□□□ -1.73
COL11A1P12107 PRDX3P3-201ENST00000447765 522 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.25□□□□□ -1.73
COL11A1P12107 APOOP2-201ENST00000461561 539 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.25□□□□□ -1.73
COL11A1P12107 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.25□□□□□ -1.73
COL11A1P12107 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.25□□□□□ -1.73
COL11A1P12107 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.25□□□□□ -1.73
COL11A1P12107 AL133247.2-201ENST00000603236 482 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL11A1P12107 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 MTND5P1-201ENST00000445440 1375 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL11A1P12107 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
COL11A1P12107 Z92545.1-201ENST00000411782 234 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.25□□□□□ -1.73
COL11A1P12107 PLGLA-201ENST00000465668 449 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.25□□□□□ -1.73
COL11A1P12107 WBP1LP4-201ENST00000505043 344 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.25□□□□□ -1.73
COL11A1P12107 RN7SKP83-201ENST00000516512 178 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.25□□□□□ -1.73
COL11A1P12107 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.25□□□□□ -1.73
COL11A1P12107 AC133552.5-201ENST00000604266 540 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 SNORA62.6-201ENST00000606322 83 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 ATE1-AS1-202ENST00000636460 506 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 AC083843.3-201ENST00000623679 2186 ntBASIC4.25□□□□□ -1.73
COL11A1P12107 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL11A1P12107 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL11A1P12107 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.24□□□□□ -1.73
COL11A1P12107 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL11A1P12107 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL11A1P12107 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL11A1P12107 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL11A1P12107 RN7SKP177-201ENST00000410567 355 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 AC096644.3-201ENST00000416788 338 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 AC005300.1-201ENST00000428401 373 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.24□□□□□ -1.73
COL11A1P12107 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.24□□□□□ -1.73
COL11A1P12107 AL591503.2-201ENST00000442314 1005 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 RN7SL271P-201ENST00000487601 295 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.24□□□□□ -1.73
COL11A1P12107 OR7A8P-201ENST00000595427 913 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 AL583832.1-201ENST00000603227 784 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 BNIP3P11-201ENST00000603878 563 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 ELOCP35-201ENST00000604289 336 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.24□□□□□ -1.73
COL11A1P12107 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.24□□□□□ -1.73
COL11A1P12107 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL11A1P12107 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL11A1P12107 AC083899.2-201ENST00000423285 1376 ntBASIC4.24□□□□□ -1.73
COL11A1P12107 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL11A1P12107 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.23□□□□□ -1.73
COL11A1P12107 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.23□□□□□ -1.73
COL11A1P12107 HMGB3P20-201ENST00000417997 600 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.23□□□□□ -1.73
COL11A1P12107 SNORA71B-202ENST00000439232 272 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 SNORA70.17-201ENST00000516449 133 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.23□□□□□ -1.73
COL11A1P12107 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.23□□□□□ -1.73
COL11A1P12107 SETP1-201ENST00000556014 845 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 MIR3200-201ENST00000580767 85 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.23□□□□□ -1.73
COL11A1P12107 AL390816.3-201ENST00000604527 1066 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL11A1P12107 AC120036.2-201ENST00000509729 1474 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL11A1P12107 RNU1-108P-201ENST00000362556 161 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 RNU4-35P-201ENST00000362588 141 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 MIR513A2-201ENST00000385249 127 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 AL035423.1-201ENST00000420331 213 ntBASIC4.23□□□□□ -1.73
COL11A1P12107 ELOCP8-201ENST00000439309 332 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms