Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC005962.2-201ENST00000611427 652 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 MIR6716-201ENST00000613413 80 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 AC004825.2-201ENST00000616634 455 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SDCBPO00560 AC009951.1-201ENST00000623674 2614 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 AP000756.2-201ENST00000624168 2567 ntBASIC3.26□□□□□ -1.89
SDCBPO00560 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
SDCBPO00560 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SDCBPO00560 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SDCBPO00560 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.26□□□□□ -1.89
SDCBPO00560 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SDCBPO00560 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.25□□□□□ -1.89
SDCBPO00560 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.25□□□□□ -1.89
SDCBPO00560 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SDCBPO00560 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SDCBPO00560 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SDCBPO00560 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.25□□□□□ -1.89
SDCBPO00560 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 MIR365B-201ENST00000362317 111 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.25□□□□□ -1.89
SDCBPO00560 SNORA56-201ENST00000383966 129 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.25□□□□□ -1.89
SDCBPO00560 MTND4LP21-201ENST00000415303 295 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.25□□□□□ -1.89
SDCBPO00560 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SDCBPO00560 RCC2P2-201ENST00000422174 918 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 RPL21P109-201ENST00000422213 475 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 AC115285.1-201ENST00000424879 736 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 FAR2P4-202ENST00000425399 584 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 SKP1P1-201ENST00000438081 489 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 AC243772.1-201ENST00000451620 410 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SDCBPO00560 AC098824.1-201ENST00000453565 980 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 RPL21P11-201ENST00000461458 483 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.25□□□□□ -1.89
SDCBPO00560 HPRT1P1-201ENST00000509498 657 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 RNA5SP179-201ENST00000517284 121 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 SUMO2P20-201ENST00000520803 283 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.25□□□□□ -1.89
SDCBPO00560 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.25□□□□□ -1.89
SDCBPO00560 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.25□□□□□ -1.89
SDCBPO00560 OR4A12P-201ENST00000530847 918 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.25□□□□□ -1.89
SDCBPO00560 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.25□□□□□ -1.89
SDCBPO00560 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.25□□□□□ -1.89
SDCBPO00560 AC020910.2-201ENST00000603635 610 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 AC091167.4-201ENST00000605079 184 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 MIR6830-201ENST00000636015 70 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 MIR6715B-201ENST00000637172 77 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 OR6C71P-202ENST00000641886 1107 ntBASIC3.25□□□□□ -1.89
SDCBPO00560 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SDCBPO00560 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.25□□□□□ -1.89
SDCBPO00560 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SDCBPO00560 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDCBPO00560 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.24□□□□□ -1.89
SDCBPO00560 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SDCBPO00560 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDCBPO00560 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SDCBPO00560 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDCBPO00560 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.24□□□□□ -1.89
SDCBPO00560 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDCBPO00560 AC011155.1-201ENST00000316512 456 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 RPL32P3-201ENST00000359025 275 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDCBPO00560 SNORA70C-201ENST00000384538 135 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 MIR3074-201ENST00000384885 81 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.24□□□□□ -1.89
SDCBPO00560 ST13P16-201ENST00000401760 781 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SDCBPO00560 NCSTNP1-201ENST00000406229 144 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.24□□□□□ -1.89
SDCBPO00560 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 AC009302.1-201ENST00000417147 390 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 AL356276.2-201ENST00000435919 558 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 AC009263.1-201ENST00000441193 1239 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 PPIAP15-201ENST00000479662 484 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.24□□□□□ -1.89
SDCBPO00560 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.24□□□□□ -1.89
SDCBPO00560 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.24□□□□□ -1.89
SDCBPO00560 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SDCBPO00560 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.24□□□□□ -1.89
SDCBPO00560 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.24□□□□□ -1.89
SDCBPO00560 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.24□□□□□ -1.89
SDCBPO00560 AF230666.2-201ENST00000602328 725 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 AC006338.2-201ENST00000616864 791 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 MIR6758-201ENST00000620653 63 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 AC112484.5-201ENST00000624189 228 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.24□□□□□ -1.89
SDCBPO00560 OR52H1-202ENST00000641796 1061 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDCBPO00560 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.24□□□□□ -1.89
SDCBPO00560 MTND4P10-201ENST00000446199 1363 ntBASIC3.24□□□□□ -1.89
SDCBPO00560 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SDCBPO00560 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SDCBPO00560 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.23□□□□□ -1.89
SDCBPO00560 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SDCBPO00560 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SDCBPO00560 RNA5SP97-201ENST00000365006 84 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms