Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 STMN1P1-201ENST00000617809 440 ntBASIC4.49□□□□□ -1.69
PCDHGA1Q9Y5H4 BX005214.3-202ENST00000619809 325 ntBASIC4.49□□□□□ -1.69
PCDHGA1Q9Y5H4 ATE1-AS1-202ENST00000636460 506 ntBASIC4.49□□□□□ -1.69
PCDHGA1Q9Y5H4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
PCDHGA1Q9Y5H4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA1Q9Y5H4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PCDHGA1Q9Y5H4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PCDHGA1Q9Y5H4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
PCDHGA1Q9Y5H4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA1Q9Y5H4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 ASNSP1-204ENST00000641977 1664 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AL133243.3-201ENST00000617415 3004 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 SNORA51.12-201ENST00000384448 134 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 SNORA37-201ENST00000384504 129 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 MIR23B-201ENST00000384832 97 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 RPL7AP25-201ENST00000423357 805 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 RPS7P5-201ENST00000441482 581 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AL359073.1-201ENST00000448036 403 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC090142.1-201ENST00000465776 462 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 RPL7P19-201ENST00000469948 618 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC073073.1-201ENST00000493920 463 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 MRPL49P2-201ENST00000521066 465 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC010306.1-201ENST00000523223 1117 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 PSMB7P1-201ENST00000556349 514 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC098483.2-201ENST00000603158 454 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC022106.2-201ENST00000620114 757 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC024595.1-201ENST00000623088 387 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC083899.2-201ENST00000423285 1376 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 AC025125.1-201ENST00000624743 1922 ntBASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA1Q9Y5H4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 MIR23A-201ENST00000385245 73 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 RN7SKP16-201ENST00000410180 299 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC011933.1-201ENST00000413334 321 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC114814.2-201ENST00000419195 485 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC023128.2-201ENST00000420880 1223 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 RPL7P57-201ENST00000423238 740 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC044797.1-201ENST00000445744 679 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 MRPL35P2-201ENST00000448009 511 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC116533.1-201ENST00000459748 321 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 PPM1AP1-201ENST00000502740 1135 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC105031.1-201ENST00000518550 476 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC010476.1-201ENST00000519111 851 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC074029.1-201ENST00000552531 1044 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC106785.1-201ENST00000565935 262 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC090079.2-201ENST00000575289 768 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 NTAN1P1-201ENST00000603150 646 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 RNF138P2-201ENST00000603490 592 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC010680.3-201ENST00000604215 520 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 OR6R2P-201ENST00000609216 300 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AL161637.1-201ENST00000622380 412 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC015871.5-202ENST00000623252 701 ntBASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA1Q9Y5H4 AC126323.6-202ENST00000568092 3511 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms