Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC108693.1-201ENST00000496068 432 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 MTND6P2-201ENST00000512226 524 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 TCP11X3P-202ENST00000514289 1254 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 SMARCE1P4-201ENST00000523647 241 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AL049872.1-201ENST00000556323 322 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC090751.1-201ENST00000566966 267 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 RN7SL356P-201ENST00000582228 248 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC012616.1-201ENST00000600294 197 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC078795.2-201ENST00000602835 1252 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 FO393422.1-201ENST00000603908 708 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC009027.1-201ENST00000604510 479 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC128687.1-201ENST00000605304 619 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC112220.3-201ENST00000605502 502 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 ATE1-AS1-202ENST00000636460 506 ntBASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
AMBRA1Q9C0C7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC011447.7-201ENST00000624228 1590 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 MTND5P29-201ENST00000458676 1807 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 RNU6-1066P-201ENST00000363573 105 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AF274854.1-201ENST00000413236 615 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC007559.1-201ENST00000428736 355 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 RPL12P17-201ENST00000432393 498 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC008072.1-201ENST00000434254 824 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 FMO7P-201ENST00000436045 768 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 TXNP5-201ENST00000441043 315 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 TPTE2P6-202ENST00000445572 1007 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 EEF1B2P6-201ENST00000445713 673 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 SEPT7P3-201ENST00000455017 621 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC072039.1-201ENST00000477611 581 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AL161747.1-201ENST00000480068 358 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC104685.1-201ENST00000502445 371 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC006499.3-201ENST00000506077 748 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 NDUFB5P1-201ENST00000508134 564 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC048346.1-201ENST00000510247 144 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC109471.1-201ENST00000511631 612 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC108471.1-201ENST00000513977 287 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC027026.1-201ENST00000532323 742 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AP000873.5-201ENST00000533906 236 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 ZNF415P1-201ENST00000582279 1166 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AL118522.2-201ENST00000616045 615 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AC018926.3-201ENST00000618841 406 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AL031667.3-201ENST00000620124 655 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AL590240.3-201ENST00000621416 943 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 AL356121.2-201ENST00000624715 780 ntBASIC4.95□□□□□ -1.62
AMBRA1Q9C0C7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms