Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ABCA3Q99758 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
ABCA3Q99758 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.98□□□□□ -1.61
ABCA3Q99758 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.98□□□□□ -1.61
ABCA3Q99758 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ABCA3Q99758 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
ABCA3Q99758 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.97□□□□□ -1.61
ABCA3Q99758 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCA3Q99758 RPL12P18-201ENST00000437175 325 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCA3Q99758 SNORA71B-202ENST00000439232 272 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.97□□□□□ -1.61
ABCA3Q99758 MTND6P5-201ENST00000448266 512 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 USP9YP2-201ENST00000504503 1000 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 USP9YP1-201ENST00000513521 1002 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.97□□□□□ -1.61
ABCA3Q99758 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.97□□□□□ -1.61
ABCA3Q99758 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ABCA3Q99758 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCA3Q99758 AC068020.1-201ENST00000594215 661 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 OR6C71P-202ENST00000641886 1107 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ABCA3Q99758 AL365440.1-201ENST00000436135 2167 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 AC083843.3-201ENST00000623679 2186 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ABCA3Q99758 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCA3Q99758 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ABCA3Q99758 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
ABCA3Q99758 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ABCA3Q99758 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ABCA3Q99758 RNU1-15P-201ENST00000353977 144 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 MIR195-201ENST00000385194 87 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 AC096644.3-201ENST00000416788 338 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 TPT1P1-201ENST00000458495 518 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 AC025518.1-201ENST00000479856 347 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 RPS3AP14-201ENST00000483907 780 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.97□□□□□ -1.61
ABCA3Q99758 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.97□□□□□ -1.61
ABCA3Q99758 RPL21P7-201ENST00000557463 483 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.97□□□□□ -1.61
ABCA3Q99758 LSM1P2-201ENST00000604911 322 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 CR392039.4-201ENST00000624968 501 ntBASIC4.97□□□□□ -1.61
ABCA3Q99758 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.97□□□□□ -1.61
ABCA3Q99758 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ABCA3Q99758 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ABCA3Q99758 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
ABCA3Q99758 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.96□□□□□ -1.61
ABCA3Q99758 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCA3Q99758 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.96□□□□□ -1.62
ABCA3Q99758 RNA5SP374-201ENST00000362939 125 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 Y_RNA.510-201ENST00000384511 114 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 AC010740.1-201ENST00000417035 684 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 OSTCP5-201ENST00000425293 453 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 MTCO1P45-201ENST00000431457 267 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 AC091862.1-201ENST00000438016 1100 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 GEMIN8P3-201ENST00000445417 720 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.96□□□□□ -1.62
ABCA3Q99758 ASNSP4-201ENST00000511103 447 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 PHBP14-201ENST00000512887 367 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.96□□□□□ -1.62
ABCA3Q99758 OR4A12P-201ENST00000530847 918 ntBASIC4.96□□□□□ -1.62
ABCA3Q99758 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.96□□□□□ -1.62
ABCA3Q99758 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.96□□□□□ -1.62
ABCA3Q99758 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCA3Q99758 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCA3Q99758 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ABCA3Q99758 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCA3Q99758 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ABCA3Q99758 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
ABCA3Q99758 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.95□□□□□ -1.62
ABCA3Q99758 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
ABCA3Q99758 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
ABCA3Q99758 OR10J6P-201ENST00000289731 930 ntBASIC4.95□□□□□ -1.62
ABCA3Q99758 U3.26-201ENST00000391236 204 ntBASIC4.95□□□□□ -1.62
ABCA3Q99758 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.95□□□□□ -1.62
ABCA3Q99758 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.95□□□□□ -1.62
ABCA3Q99758 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.95□□□□□ -1.62
ABCA3Q99758 RPS27AP1-201ENST00000475545 471 ntBASIC4.95□□□□□ -1.62
ABCA3Q99758 AC012123.2-201ENST00000485809 248 ntBASIC4.95□□□□□ -1.62
ABCA3Q99758 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.95□□□□□ -1.62
ABCA3Q99758 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.95□□□□□ -1.62
ABCA3Q99758 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.95□□□□□ -1.62
ABCA3Q99758 AL033523.1-201ENST00000605153 153 ntBASIC4.95□□□□□ -1.62
ABCA3Q99758 MIR7112-201ENST00000616126 65 ntBASIC4.95□□□□□ -1.62
ABCA3Q99758 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
ABCA3Q99758 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.95□□□□□ -1.62
ABCA3Q99758 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
ABCA3Q99758 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.95□□□□□ -1.62
ABCA3Q99758 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ABCA3Q99758 DYNLL1P7-201ENST00000429273 258 ntBASIC4.94□□□□□ -1.62
ABCA3Q99758 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.94□□□□□ -1.62
ABCA3Q99758 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.94□□□□□ -1.62
ABCA3Q99758 RN7SL807P-201ENST00000470923 297 ntBASIC4.94□□□□□ -1.62
ABCA3Q99758 AC006445.1-201ENST00000491925 405 ntBASIC4.94□□□□□ -1.62
ABCA3Q99758 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.94□□□□□ -1.62
ABCA3Q99758 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.94□□□□□ -1.62
ABCA3Q99758 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.94□□□□□ -1.62
ABCA3Q99758 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.94□□□□□ -1.62
ABCA3Q99758 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.94□□□□□ -1.62
ABCA3Q99758 AC135507.2-201ENST00000612443 309 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms