Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 Z75741.2-201ENST00000417272 1167 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 HMGB1P31-201ENST00000437242 427 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 TRIM60P18-201ENST00000441518 828 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 COX6CP2-201ENST00000444980 225 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 HMGB1P48-201ENST00000446155 598 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AL034418.1-201ENST00000448675 860 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC104634.1-201ENST00000452720 462 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 SNRPGP9-201ENST00000456025 225 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 GTF2IP12-201ENST00000456547 356 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AL121769.1-201ENST00000469473 401 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 MTCO2P30-201ENST00000503662 364 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 RNU6-1153P-201ENST00000516760 105 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 NPM1P52-201ENST00000518264 846 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC012400.1-201ENST00000518452 381 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 RAB11AP2-201ENST00000545905 639 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC015871.2-201ENST00000603605 948 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC006363.1-201ENST00000603806 463 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC009597.2-201ENST00000604659 592 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC211433.2-201ENST00000608433 387 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AL159169.2-201ENST00000610061 1269 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 OR1S1-201ENST00000624470 978 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AC135068.12-201ENST00000637370 931 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 AL157700.1-201ENST00000561973 1432 ntBASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP1Q96SZ6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.52
CDK5RAP1Q96SZ6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC092747.4-201ENST00000620519 1861 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 U3.2-201ENST00000362981 210 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 RNU1-43P-201ENST00000365052 165 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 RNU6-729P-201ENST00000384399 107 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 SNORA48.4-201ENST00000391089 134 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 SNORD115-47-201ENST00000391226 86 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 DUTP5-201ENST00000406790 469 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 SPTLC1P2-201ENST00000407089 121 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 MRPS36P1-201ENST00000421291 307 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 RWDD4P2-201ENST00000426392 563 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 RPS27AP6-201ENST00000427962 448 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 BRWD1P3-201ENST00000428816 390 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC005033.1-201ENST00000428904 813 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC005189.1-201ENST00000431286 310 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 GAPDHP14-201ENST00000450472 937 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC022336.1-201ENST00000475510 337 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC098583.1-201ENST00000480875 255 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC058823.1-201ENST00000485315 474 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 RNA5SP373-201ENST00000517271 95 ntBASIC5.52□□□□□ -1.53
CDK5RAP1Q96SZ6 AC027308.1-201ENST00000517993 110 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms