Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC093655.2-201ENST00000425735 631 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 VDAC1P6-201ENST00000430062 855 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 USP9YP14-201ENST00000430663 563 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC008072.1-201ENST00000434254 824 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AL391987.1-201ENST00000441025 200 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 MTND5P2-201ENST00000442927 1142 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 MTCO1P48-201ENST00000448024 1096 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AL133217.1-201ENST00000450980 425 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 snoU13.7-201ENST00000459220 104 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 RN7SL189P-201ENST00000468631 289 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 NDUFA5P9-201ENST00000472609 340 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 OR2AO1P-201ENST00000476497 403 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AL049874.2-201ENST00000492636 288 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 KLRA1P-201ENST00000503499 986 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 RNU6-1129P-201ENST00000515964 104 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 UBE2NP1-201ENST00000545592 458 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 RPL10P14-201ENST00000565265 298 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AL512347.1-201ENST00000566420 503 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC110760.3-201ENST00000598794 467 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC004987.4-201ENST00000603383 338 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC018638.7-201ENST00000605836 1114 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AL360219.1-201ENST00000610230 366 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 MIR6839-201ENST00000620425 113 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC091932.2-201ENST00000623014 291 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AL359757.1-201ENST00000623176 255 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 AC092184.1-201ENST00000625042 715 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 MIR4302-201ENST00000638058 60 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT78Q8N1N4 OR55B1P-203ENST00000641518 2602 ntBASIC5.08□□□□□ -1.6
KRT78Q8N1N4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 OR4A15-201ENST00000314706 1035 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 RNU6-621P-201ENST00000364752 109 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 RNA5SP223-201ENST00000365174 120 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 MIR589-201ENST00000385238 99 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AL590084.2-201ENST00000401481 382 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AC098592.1-201ENST00000419352 333 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 RPL30P3-201ENST00000424262 333 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 CLUHP1-201ENST00000435012 1190 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 RPS25P9-201ENST00000435591 252 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 NCOR1P1-202ENST00000486162 291 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 EIF3LP3-201ENST00000495197 822 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 RPF2P2-201ENST00000504693 896 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AC093281.2-201ENST00000510153 597 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 MTND1P22-201ENST00000510572 951 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AC016559.2-201ENST00000510759 359 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AC018797.3-201ENST00000513388 1241 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AC006427.1-201ENST00000514359 712 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 RN7SKP82-201ENST00000516786 223 ntBASIC5.07□□□□□ -1.6
KRT78Q8N1N4 AC012400.1-201ENST00000518452 381 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms