Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RPL23AP72-201ENST00000492447 435 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 RNU7-143P-201ENST00000516781 65 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 RNA5SP143-201ENST00000516936 115 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 IGLVIV-65-201ENST00000517313 360 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC092851.1-201ENST00000535964 478 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC067805.1-201ENST00000559344 470 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC022884.3-201ENST00000579571 248 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 ABI1P1-201ENST00000603375 1120 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 FAM25E-202ENST00000608562 189 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AP003497.2-201ENST00000624220 967 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 FAM35DP-201ENST00000323387 2712 ntBASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.06□□□□□ -1.76
NUDCD3Q8IVD9 AC027287.1-201ENST00000553115 1453 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC007390.2-201ENST00000606229 3803 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 IPO8P1-201ENST00000455509 3109 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AL035419.1-201ENST00000397037 564 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 NRBF2P2-201ENST00000413087 861 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 P2RY10P2-201ENST00000416730 913 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 RPEP3-201ENST00000425462 676 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC006466.1-201ENST00000438721 289 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 MTCYBP12-201ENST00000440559 1134 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 RPS27AP16-201ENST00000492222 470 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC106872.2-201ENST00000494303 480 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC093824.1-201ENST00000508796 343 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC026726.1-201ENST00000512859 601 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 RNA5SP519-201ENST00000516480 119 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AP006289.1-201ENST00000538089 277 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 MIR4270-201ENST00000581799 70 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 SS18L2P2-201ENST00000583960 235 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AL451044.1-201ENST00000604867 238 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AL096803.3-201ENST00000609032 532 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 FAM27D1-201ENST00000612308 341 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC009032.1-201ENST00000617574 431 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 RN7SL722P-201ENST00000617780 284 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 RN7SL565P-201ENST00000618246 284 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AL139254.3-201ENST00000641097 674 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC025031.4-201ENST00000621248 3271 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AC017002.4-201ENST00000604721 1525 ntBASIC4.05□□□□□ -1.76
NUDCD3Q8IVD9 AL359715.4-201ENST00000606629 1436 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AL133412.1-201ENST00000380194 2992 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 RNU6-666P-201ENST00000363499 107 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AL139128.1-201ENST00000413921 941 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AL360081.1-201ENST00000428299 555 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 RPL7P28-201ENST00000437739 740 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AL645939.1-201ENST00000453429 797 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 RPL7P32-201ENST00000457119 744 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 RN7SL98P-201ENST00000462271 300 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 RN7SL271P-201ENST00000487601 295 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AF213884.1-201ENST00000488102 463 ntBASIC4.04□□□□□ -1.76
NUDCD3Q8IVD9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms