Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.74□□□□□ -1.65
RFX7Q2KHR2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.74□□□□□ -1.65
RFX7Q2KHR2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFX7Q2KHR2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 SNORD46.1-201ENST00000364139 104 ntBASIC4.73□□□□□ -1.65
RFX7Q2KHR2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 RN7SKP156-201ENST00000410308 342 ntBASIC4.73□□□□□ -1.65
RFX7Q2KHR2 RAB9AP3-201ENST00000412737 573 ntBASIC4.73□□□□□ -1.65
RFX7Q2KHR2 GOT2P5-201ENST00000433995 546 ntBASIC4.73□□□□□ -1.65
RFX7Q2KHR2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 RAB9AP1-201ENST00000449393 573 ntBASIC4.73□□□□□ -1.65
RFX7Q2KHR2 AL451050.1-201ENST00000450126 415 ntBASIC4.73□□□□□ -1.65
RFX7Q2KHR2 AC006042.3-201ENST00000454684 1469 ntBASIC4.73□□□□□ -1.65
RFX7Q2KHR2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 RPL7L1P8-201ENST00000469911 741 ntBASIC4.73□□□□□ -1.65
RFX7Q2KHR2 AL139099.1-201ENST00000497398 403 ntBASIC4.73□□□□□ -1.65
RFX7Q2KHR2 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RFX7Q2KHR2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC026523.2-201ENST00000625039 7739 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC007066.1-201ENST00000392902 381 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 Z97055.1-201ENST00000419730 712 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC092647.1-201ENST00000420654 287 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 OR4F13P-201ENST00000428478 931 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 RN7SL323P-201ENST00000494712 295 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 NPM1P47-201ENST00000560843 856 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC015726.1-201ENST00000602353 681 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AL390816.3-201ENST00000604527 1066 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AL591424.2-201ENST00000617023 128 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AL645927.2-201ENST00000618350 349 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC244100.1-202ENST00000621554 382 ntBASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFX7Q2KHR2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.71□□□□□ -1.65
RFX7Q2KHR2 AP002001.2-201ENST00000529025 1469 ntBASIC4.71□□□□□ -1.65
RFX7Q2KHR2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AL627171.1-201ENST00000618845 1308 ntBASIC4.71□□□□□ -1.66
RFX7Q2KHR2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 MIR449B-201ENST00000384995 97 ntBASIC4.71□□□□□ -1.66
RFX7Q2KHR2 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AL591363.1-201ENST00000450091 483 ntBASIC4.71□□□□□ -1.66
RFX7Q2KHR2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 RPS3AP6-201ENST00000484430 795 ntBASIC4.71□□□□□ -1.66
RFX7Q2KHR2 OR9N1P-201ENST00000491296 333 ntBASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 CYCSP30-201ENST00000546447 172 ntBASIC4.71□□□□□ -1.66
RFX7Q2KHR2 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AL139089.1-201ENST00000620372 975 ntBASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AC103858.2-201ENST00000621471 543 ntBASIC4.71□□□□□ -1.66
RFX7Q2KHR2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFX7Q2KHR2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX7Q2KHR2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
RFX7Q2KHR2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.7□□□□□ -1.66
RFX7Q2KHR2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFX7Q2KHR2 ZNF962P-201ENST00000443465 3140 ntBASIC4.7□□□□□ -1.66
RFX7Q2KHR2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFX7Q2KHR2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.7□□□□□ -1.66
RFX7Q2KHR2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms