Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL590806.1-201ENST00000415818 853 ntBASIC3.6□□□□□ -1.83
ACTBP60709 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.6□□□□□ -1.83
ACTBP60709 MTCO1P54-201ENST00000430139 712 ntBASIC3.6□□□□□ -1.83
ACTBP60709 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.6□□□□□ -1.83
ACTBP60709 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.6□□□□□ -1.83
ACTBP60709 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.6□□□□□ -1.83
ACTBP60709 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.6□□□□□ -1.83
ACTBP60709 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.6□□□□□ -1.83
ACTBP60709 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.6□□□□□ -1.83
ACTBP60709 AL513533.1-201ENST00000453728 415 ntBASIC3.6□□□□□ -1.83
ACTBP60709 RPL23AP12-201ENST00000467573 473 ntBASIC3.6□□□□□ -1.83
ACTBP60709 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.6□□□□□ -1.83
ACTBP60709 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.6□□□□□ -1.83
ACTBP60709 RPL23AP72-201ENST00000492447 435 ntBASIC3.6□□□□□ -1.83
ACTBP60709 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.6□□□□□ -1.83
ACTBP60709 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.6□□□□□ -1.83
ACTBP60709 AC005798.1-201ENST00000513715 387 ntBASIC3.6□□□□□ -1.83
ACTBP60709 AC010342.1-201ENST00000514047 877 ntBASIC3.6□□□□□ -1.83
ACTBP60709 MIR2114-201ENST00000516645 80 ntBASIC3.6□□□□□ -1.83
ACTBP60709 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.6□□□□□ -1.83
ACTBP60709 IGKV2-23-201ENST00000518729 323 ntBASIC3.6□□□□□ -1.83
ACTBP60709 OR5BC1P-201ENST00000529327 739 ntBASIC3.6□□□□□ -1.83
ACTBP60709 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ACTBP60709 AC015911.5-201ENST00000587076 451 ntBASIC3.6□□□□□ -1.83
ACTBP60709 AC068790.7-201ENST00000602347 528 ntBASIC3.6□□□□□ -1.83
ACTBP60709 AC093765.1-201ENST00000603758 881 ntBASIC3.6□□□□□ -1.83
ACTBP60709 AC012213.4-201ENST00000606457 354 ntBASIC3.6□□□□□ -1.83
ACTBP60709 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.6□□□□□ -1.83
ACTBP60709 MIR6820-201ENST00000611508 62 ntBASIC3.6□□□□□ -1.83
ACTBP60709 RMST_5.1-201ENST00000618704 126 ntBASIC3.6□□□□□ -1.83
ACTBP60709 AP005019.3-201ENST00000620418 560 ntBASIC3.6□□□□□ -1.83
ACTBP60709 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.6□□□□□ -1.83
ACTBP60709 AC009950.2-201ENST00000636548 183 ntBASIC3.6□□□□□ -1.83
ACTBP60709 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ACTBP60709 FAM35DP-201ENST00000323387 2712 ntBASIC3.6□□□□□ -1.83
ACTBP60709 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ACTBP60709 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ACTBP60709 DHX40P1-201ENST00000588725 1412 ntBASIC3.6□□□□□ -1.83
ACTBP60709 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTBP60709 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.83
ACTBP60709 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ACTBP60709 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.59□□□□□ -1.83
ACTBP60709 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ACTBP60709 EIF2AP4-201ENST00000424793 1781 ntBASIC3.59□□□□□ -1.83
ACTBP60709 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTBP60709 AC079741.1-201ENST00000321498 212 ntBASIC3.59□□□□□ -1.83
ACTBP60709 RNVU1-6-201ENST00000364688 164 ntBASIC3.59□□□□□ -1.83
ACTBP60709 AC097374.1-203ENST00000400783 485 ntBASIC3.59□□□□□ -1.83
ACTBP60709 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ACTBP60709 AL590139.1-201ENST00000416267 400 ntBASIC3.59□□□□□ -1.83
ACTBP60709 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.59□□□□□ -1.83
ACTBP60709 FAR2P4-202ENST00000425399 584 ntBASIC3.59□□□□□ -1.83
ACTBP60709 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ACTBP60709 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.59□□□□□ -1.83
ACTBP60709 RNU7-27P-201ENST00000459281 62 ntBASIC3.59□□□□□ -1.83
ACTBP60709 RPL23AP62-201ENST00000463396 453 ntBASIC3.59□□□□□ -1.83
ACTBP60709 AC007537.2-201ENST00000472093 511 ntBASIC3.59□□□□□ -1.83
ACTBP60709 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
ACTBP60709 KCTD9P2-201ENST00000512203 1013 ntBASIC3.59□□□□□ -1.83
ACTBP60709 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.59□□□□□ -1.83
ACTBP60709 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTBP60709 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.59□□□□□ -1.83
ACTBP60709 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.59□□□□□ -1.83
ACTBP60709 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.59□□□□□ -1.83
ACTBP60709 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ACTBP60709 AP000827.1-201ENST00000527814 258 ntBASIC3.59□□□□□ -1.83
ACTBP60709 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.59□□□□□ -1.83
ACTBP60709 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTBP60709 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTBP60709 AC022884.3-201ENST00000579571 248 ntBASIC3.59□□□□□ -1.83
ACTBP60709 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTBP60709 AC244505.7-201ENST00000599675 272 ntBASIC3.59□□□□□ -1.83
ACTBP60709 MRPS35P3-201ENST00000603189 709 ntBASIC3.59□□□□□ -1.83
ACTBP60709 AC025175.1-201ENST00000606482 759 ntBASIC3.59□□□□□ -1.83
ACTBP60709 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTBP60709 AC243654.2-201ENST00000612843 443 ntBASIC3.59□□□□□ -1.83
ACTBP60709 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTBP60709 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ACTBP60709 AL133383.2-201ENST00000622958 2336 ntBASIC3.59□□□□□ -1.84
ACTBP60709 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
ACTBP60709 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ACTBP60709 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.58□□□□□ -1.84
ACTBP60709 RAD17P1-201ENST00000418130 2042 ntBASIC3.58□□□□□ -1.84
ACTBP60709 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
ACTBP60709 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ACTBP60709 PTMAP5-201ENST00000393073 333 ntBASIC3.58□□□□□ -1.84
ACTBP60709 AC013404.1-201ENST00000413068 249 ntBASIC3.58□□□□□ -1.84
ACTBP60709 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.58□□□□□ -1.84
ACTBP60709 AC069213.2-201ENST00000420238 366 ntBASIC3.58□□□□□ -1.84
ACTBP60709 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.58□□□□□ -1.84
ACTBP60709 AC006065.1-201ENST00000422539 802 ntBASIC3.58□□□□□ -1.84
ACTBP60709 HMGB3P5-201ENST00000428894 612 ntBASIC3.58□□□□□ -1.84
ACTBP60709 RPL7P4-203ENST00000430239 730 ntBASIC3.58□□□□□ -1.84
ACTBP60709 MTCYBP29-201ENST00000436327 1006 ntBASIC3.58□□□□□ -1.84
ACTBP60709 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.58□□□□□ -1.84
ACTBP60709 AL162151.2-201ENST00000448875 158 ntBASIC3.58□□□□□ -1.84
ACTBP60709 RPL36AP13-201ENST00000457490 317 ntBASIC3.58□□□□□ -1.84
ACTBP60709 RN7SL481P-201ENST00000477764 299 ntBASIC3.58□□□□□ -1.84
ACTBP60709 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.58□□□□□ -1.84
ACTBP60709 NIPA2P2-201ENST00000496376 1083 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms