Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNU1-13P-201ENST00000384499 162 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 RNU6-225P-201ENST00000384613 103 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 RPL23AP48-201ENST00000406913 488 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 AL353692.2-201ENST00000407054 335 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.99□□□□□ -1.77
EFNA3P52797 AC009302.1-201ENST00000417147 390 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 COX6CP15-201ENST00000426313 211 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.99□□□□□ -1.77
EFNA3P52797 VDAC1P6-201ENST00000430062 855 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 RPL23AP25-201ENST00000430973 463 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 AL356276.2-201ENST00000435919 558 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
EFNA3P52797 AL512326.1-201ENST00000443050 721 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 RNU7-27P-201ENST00000459281 62 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 APOOP2-201ENST00000461561 539 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.99□□□□□ -1.77
EFNA3P52797 RPS27AP13-201ENST00000498403 237 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 AC010374.1-201ENST00000503762 1237 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 PARP4P3-201ENST00000510265 317 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 VWA8P1-201ENST00000510889 176 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 RNU6-347P-201ENST00000516658 105 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 RNA5SP73-201ENST00000516744 108 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
EFNA3P52797 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.99□□□□□ -1.77
EFNA3P52797 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.99□□□□□ -1.77
EFNA3P52797 TVP23BP1-201ENST00000557500 617 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 MIR3160-1-201ENST00000577972 85 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 MIR3908-201ENST00000579798 126 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.99□□□□□ -1.77
EFNA3P52797 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 AC006116.5-201ENST00000591936 559 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 AC090525.3-201ENST00000605601 189 ntBASIC3.99□□□□□ -1.77
EFNA3P52797 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.99□□□□□ -1.77
EFNA3P52797 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
EFNA3P52797 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
EFNA3P52797 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
EFNA3P52797 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.99□□□□□ -1.77
EFNA3P52797 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
EFNA3P52797 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.98□□□□□ -1.77
EFNA3P52797 AP000756.2-201ENST00000624168 2567 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.98□□□□□ -1.77
EFNA3P52797 RNA5SP502-201ENST00000362694 119 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 SNORA70C-201ENST00000384538 135 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 LAP3P1-201ENST00000403648 294 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 RN7SKP33-201ENST00000410942 340 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 AC010385.1-201ENST00000412374 256 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.98□□□□□ -1.77
EFNA3P52797 OR2X1P-201ENST00000421144 687 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.98□□□□□ -1.77
EFNA3P52797 AL590762.3-201ENST00000436372 640 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.98□□□□□ -1.77
EFNA3P52797 VN1R32P-201ENST00000452234 905 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.98□□□□□ -1.77
EFNA3P52797 MTND2P6-201ENST00000455337 1030 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 CCDC75P1-201ENST00000469247 791 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 AC093663.2-201ENST00000484625 313 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.98□□□□□ -1.77
EFNA3P52797 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.98□□□□□ -1.77
EFNA3P52797 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.98□□□□□ -1.77
EFNA3P52797 AC026402.1-201ENST00000513642 170 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 AC006064.5-201ENST00000541782 248 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.98□□□□□ -1.77
EFNA3P52797 AC008083.2-201ENST00000546707 476 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.98□□□□□ -1.77
EFNA3P52797 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.98□□□□□ -1.77
EFNA3P52797 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.98□□□□□ -1.77
EFNA3P52797 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.98□□□□□ -1.77
EFNA3P52797 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 AL096803.3-201ENST00000609032 532 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 AP004607.9-201ENST00000618202 316 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 MIR8059-201ENST00000620427 81 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.98□□□□□ -1.77
EFNA3P52797 MIR492-201ENST00000638676 116 ntBASIC3.98□□□□□ -1.77
EFNA3P52797 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
EFNA3P52797 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.98□□□□□ -1.77
EFNA3P52797 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.98□□□□□ -1.77
EFNA3P52797 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.98□□□□□ -1.77
EFNA3P52797 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
EFNA3P52797 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.97□□□□□ -1.77
EFNA3P52797 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
EFNA3P52797 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms