Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXC4P09017 MIR432-201ENST00000606207 94 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 AC099676.1-201ENST00000608886 657 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC4P09017 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXC4P09017 AC010329.2-201ENST00000595195 2737 ntBASIC4.03□□□□□ -1.76
HOXC4P09017 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC4P09017 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HOXC4P09017 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HOXC4P09017 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC4P09017 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXC4P09017 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HOXC4P09017 AC087190.4-201ENST00000574616 8334 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC4P09017 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HOXC4P09017 OR11H5P-202ENST00000641612 1325 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC4P09017 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC4P09017 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HOXC4P09017 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
HOXC4P09017 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC4P09017 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HOXC4P09017 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC4P09017 SNORA37-201ENST00000384504 129 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 MIR93-201ENST00000385024 80 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.02□□□□□ -1.77
HOXC4P09017 RAC1P3-201ENST00000416129 580 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC004552.1-201ENST00000419089 348 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 OR6K4P-201ENST00000423179 955 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 BX119904.1-201ENST00000432026 348 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC4P09017 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC4P09017 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC4P09017 OR7L1P-201ENST00000456181 380 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC4P09017 HMGN1P8-201ENST00000463578 288 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 RPS26P3-201ENST00000470205 348 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 RN7SL132P-201ENST00000478131 296 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC090543.2-201ENST00000483963 348 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC004057.1-201ENST00000485827 348 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 PRELID3BP7-201ENST00000503606 469 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC010460.1-201ENST00000507087 466 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC018797.3-201ENST00000513388 1241 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC4P09017 RNA5SP154-201ENST00000516193 111 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 RNU7-143P-201ENST00000516781 65 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 MTND1P6-201ENST00000523621 946 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 OR7E10P-201ENST00000526420 991 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXC4P09017 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC4P09017 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC4P09017 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC4P09017 AL049874.4-201ENST00000557593 255 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC106785.1-201ENST00000565935 262 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC4P09017 AC027281.1-201ENST00000574178 758 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC012417.1-201ENST00000582307 1039 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXC4P09017 AC025946.2-201ENST00000603398 234 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC114878.2-201ENST00000604863 1251 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AL021368.1-201ENST00000607490 540 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC064801.1-201ENST00000612025 407 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 AC074276.2-201ENST00000619891 348 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 CDRT1-208ENST00000630868 794 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXC4P09017 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXC4P09017 BX005019.1-201ENST00000561881 1810 ntBASIC4.02□□□□□ -1.77
HOXC4P09017 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXC4P09017 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HOXC4P09017 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXC4P09017 ASNSP1-201ENST00000518311 1939 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC4P09017 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXC4P09017 RNU6-1251P-201ENST00000364502 107 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 MT-TP-201ENST00000387461 68 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 SNORD65-201ENST00000391079 73 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 RNA5SP104-201ENST00000410989 118 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 RNA5SP39-201ENST00000411245 120 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 KCTD10P1-201ENST00000434203 625 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 BTBD7P2-201ENST00000441962 620 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 RPS4XP4-201ENST00000443195 763 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC4P09017 CALM1P2-201ENST00000452941 448 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 C1DP3-201ENST00000455013 423 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC4P09017 APOOP2-201ENST00000461561 539 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXC4P09017 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXC4P09017 RPS26P28-201ENST00000470806 348 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC4P09017 MTND3P6-201ENST00000485242 339 ntBASIC4.01□□□□□ -1.77
HOXC4P09017 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC4P09017 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXC4P09017 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXC4P09017 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms