Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNA5SP97-201ENST00000365006 84 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 AL512430.2-201ENST00000406786 339 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 AL139247.1-201ENST00000422768 325 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 AL645931.1-201ENST00000439737 410 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC103987.1-201ENST00000473394 348 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 VN1R105P-201ENST00000486595 910 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC010460.1-201ENST00000507087 466 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC092747.2-201ENST00000545069 983 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 CD24P2-201ENST00000565486 219 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC087499.8-201ENST00000578406 226 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC020914.4-201ENST00000597690 277 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTDNEP1O95476 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CTDNEP1O95476 AC123912.3-201ENST00000600907 1367 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 MTCO1P22-201ENST00000604619 1360 ntBASIC4.38□□□□□ -1.71
CTDNEP1O95476 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTDNEP1O95476 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTDNEP1O95476 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTDNEP1O95476 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 MIR30B-201ENST00000384850 88 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 RPL7P60-201ENST00000397636 735 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 AL691447.1-201ENST00000419456 387 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC091390.1-201ENST00000433904 331 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 UBA52P3-201ENST00000491303 382 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 RN7SKP21-201ENST00000516503 220 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 AF186190.1-201ENST00000517470 480 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 OR8R1P-201ENST00000543943 764 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC053481.4-201ENST00000583164 216 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC020910.2-201ENST00000603635 610 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC015849.6-201ENST00000605454 474 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC026368.1-201ENST00000614934 690 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 AC068831.8-201ENST00000620171 435 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 AP002967.1-201ENST00000624203 539 ntBASIC4.37□□□□□ -1.71
CTDNEP1O95476 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTDNEP1O95476 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTDNEP1O95476 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 MTND4LP21-201ENST00000415303 295 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 AC073136.2-201ENST00000417282 849 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 AC022034.3-201ENST00000471393 478 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 AGGF1P3-201ENST00000493675 1213 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 AC008011.1-201ENST00000545989 227 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 DUX4L52-201ENST00000549363 777 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 RMST_9.1-201ENST00000619945 193 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 AL354798.1-201ENST00000622505 329 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTDNEP1O95476 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 AC027287.1-201ENST00000553115 1453 ntBASIC4.36□□□□□ -1.71
CTDNEP1O95476 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.36□□□□□ -1.71
CTDNEP1O95476 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTDNEP1O95476 AC073073.2-201ENST00000609827 2578 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 SNORA3.3-201ENST00000408712 125 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.35□□□□□ -1.71
CTDNEP1O95476 HIGD1AP12-201ENST00000427832 281 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 AL121578.1-201ENST00000428051 892 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 RPL7P4-203ENST00000430239 730 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 MOB1AP1-201ENST00000430903 535 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 SKP1P1-201ENST00000438081 489 ntBASIC4.35□□□□□ -1.71
CTDNEP1O95476 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms