Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 NIPA2P1-201ENST00000426223 976 ntBASIC5.07□□□□□ -1.6
PROM1O43490 RPL7AP49-201ENST00000429522 581 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AL591438.1-201ENST00000433508 581 ntBASIC5.07□□□□□ -1.6
PROM1O43490 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 CYCSP12-201ENST00000437729 300 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 AC012512.1-201ENST00000446594 718 ntBASIC5.07□□□□□ -1.6
PROM1O43490 RPL31P44-201ENST00000447680 377 ntBASIC5.07□□□□□ -1.6
PROM1O43490 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AC011225.1-201ENST00000457751 369 ntBASIC5.07□□□□□ -1.6
PROM1O43490 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 AC058823.1-201ENST00000485315 474 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AL049874.2-201ENST00000492636 288 ntBASIC5.07□□□□□ -1.6
PROM1O43490 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.07□□□□□ -1.6
PROM1O43490 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 HMGB3P13-201ENST00000511263 607 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 AC108471.1-201ENST00000513977 287 ntBASIC5.07□□□□□ -1.6
PROM1O43490 RFPL4AP5-201ENST00000514977 504 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 OR5AZ1P-201ENST00000527448 943 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.07□□□□□ -1.6
PROM1O43490 HIGD1AP10-201ENST00000527837 282 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AP001317.1-201ENST00000531194 960 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.07□□□□□ -1.6
PROM1O43490 AC107918.3-201ENST00000533272 382 ntBASIC5.07□□□□□ -1.6
PROM1O43490 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PROM1O43490 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.07□□□□□ -1.6
PROM1O43490 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.07□□□□□ -1.6
PROM1O43490 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 MTATP6P3-201ENST00000581686 676 ntBASIC5.07□□□□□ -1.6
PROM1O43490 MIR4472-2-201ENST00000582069 67 ntBASIC5.07□□□□□ -1.6
PROM1O43490 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.07□□□□□ -1.6
PROM1O43490 U73023.1-201ENST00000603134 700 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AC123786.2-201ENST00000603459 275 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AC069545.1-201ENST00000605671 358 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AC069209.1-201ENST00000619282 651 ntBASIC5.07□□□□□ -1.6
PROM1O43490 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 AL078621.3-201ENST00000623707 2042 ntBASIC5.07□□□□□ -1.6
PROM1O43490 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.07□□□□□ -1.6
PROM1O43490 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
PROM1O43490 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PROM1O43490 AC073136.1-201ENST00000449426 2884 ntBASIC5.06□□□□□ -1.6
PROM1O43490 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PROM1O43490 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PROM1O43490 MTCO1P6-201ENST00000481192 1384 ntBASIC5.06□□□□□ -1.6
PROM1O43490 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PROM1O43490 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PROM1O43490 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PROM1O43490 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.06□□□□□ -1.6
PROM1O43490 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
PROM1O43490 RNU6-931P-201ENST00000363850 107 ntBASIC5.06□□□□□ -1.6
PROM1O43490 RN7SKP224-201ENST00000364140 325 ntBASIC5.06□□□□□ -1.6
PROM1O43490 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PROM1O43490 SNORA48.4-201ENST00000391089 134 ntBASIC5.06□□□□□ -1.6
PROM1O43490 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PROM1O43490 OR4K12P-201ENST00000406538 961 ntBASIC5.06□□□□□ -1.6
PROM1O43490 CTSL3P-202ENST00000412179 788 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC211486.3-201ENST00000412694 621 ntBASIC5.06□□□□□ -1.6
PROM1O43490 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
PROM1O43490 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.06□□□□□ -1.6
PROM1O43490 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.06□□□□□ -1.6
PROM1O43490 C8orf59P1-201ENST00000429930 303 ntBASIC5.06□□□□□ -1.6
PROM1O43490 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.06□□□□□ -1.6
PROM1O43490 AL590103.1-201ENST00000434488 307 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC092013.1-201ENST00000438795 332 ntBASIC5.06□□□□□ -1.6
PROM1O43490 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.06□□□□□ -1.6
PROM1O43490 ELOCP10-201ENST00000440624 327 ntBASIC5.06□□□□□ -1.6
PROM1O43490 RPS11P7-201ENST00000442125 465 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 SRRM1P2-201ENST00000464531 1192 ntBASIC5.06□□□□□ -1.6
PROM1O43490 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 AC073522.1-201ENST00000483312 377 ntBASIC5.06□□□□□ -1.6
PROM1O43490 UBA52P7-201ENST00000486088 380 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.06□□□□□ -1.6
PROM1O43490 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PROM1O43490 CDC42P3-201ENST00000518493 633 ntBASIC5.06□□□□□ -1.6
PROM1O43490 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.06□□□□□ -1.6
PROM1O43490 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms