Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC104446.1-201ENST00000613728 1321 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC079741.1-201ENST00000321498 212 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 OR1L6-202ENST00000373684 1044 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 RNU6-413P-201ENST00000384115 107 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 RNU6-185P-201ENST00000384421 107 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 ERHP2-201ENST00000402323 299 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 RPS27AP11-201ENST00000402798 447 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AL590084.1-201ENST00000407885 387 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 RAB28P1-201ENST00000411517 641 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC013404.1-201ENST00000413068 249 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC007738.1-201ENST00000413892 348 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 LUZP4P1-201ENST00000415420 344 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 RAC1P8-201ENST00000427086 527 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 COX6CP13-201ENST00000428703 226 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 RPL19P16-201ENST00000433839 588 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 UBE2D3P1-201ENST00000436669 444 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 CYCSP24-201ENST00000445119 316 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 OR1H1P-201ENST00000448731 937 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC073264.2-201ENST00000448886 166 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AL133217.1-201ENST00000450980 425 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC245028.2-201ENST00000458673 253 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 RNU7-140P-201ENST00000459546 60 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 MRPS33P3-201ENST00000513456 322 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 OR7H2P-201ENST00000513483 306 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 snoZ278.1-201ENST00000517059 112 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 RAB9BP1-201ENST00000519581 626 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 MTND2P26-201ENST00000528255 1029 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC027369.5-201ENST00000533838 755 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AL022161.1-201ENST00000604390 213 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC096553.1-201ENST00000605169 829 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AC245008.1-201ENST00000608123 476 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 AP005432.2-201ENST00000608162 586 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 MIR6839-201ENST00000620425 113 ntBASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSX2IPQ9Y2D8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 BX005019.1-201ENST00000561881 1810 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 FAM133CP-201ENST00000332869 704 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 SNORD113-6-201ENST00000363345 75 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 SNORD116-1-201ENST00000384335 95 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 MIR298-201ENST00000401212 88 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AL390316.1-201ENST00000406279 553 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 MIR1271-201ENST00000408537 86 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 TCEA1P4-201ENST00000415066 844 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 OR4K6P-201ENST00000416478 897 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AF186996.5-201ENST00000418098 904 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 ZNF885P-201ENST00000420174 1098 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 DPY19L1P2-201ENST00000426647 915 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 MTCO1P52-201ENST00000433928 531 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 TCEA1P1-201ENST00000449716 880 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC233982.1-201ENST00000451247 436 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 NPM1P13-201ENST00000452663 865 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC091180.1-201ENST00000462104 372 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 RPL23AP37-201ENST00000479658 549 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC126121.1-201ENST00000482313 553 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC011005.3-201ENST00000491624 395 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 ENPP7P9-201ENST00000514456 627 ntBASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.34□□□□□ -1.55
SSX2IPQ9Y2D8 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms