Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 RN7SL323P-201ENST00000494712 295 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AC017037.1-201ENST00000508460 471 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AL133247.2-201ENST00000603236 482 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AL606490.9-201ENST00000603331 271 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AL451049.1-201ENST00000608672 497 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 ZNF962P-201ENST00000443465 3140 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 U1.1-201ENST00000384101 164 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 RAB9AP3-201ENST00000412737 573 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 HLA-N-201ENST00000437516 135 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 RPL6P5-201ENST00000445678 828 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 RAB9AP1-201ENST00000449393 573 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 OR9M1P-201ENST00000459641 921 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 RPS20P21-201ENST00000466859 343 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 RPS26P28-201ENST00000470806 348 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AC113430.1-201ENST00000506872 718 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AC068790.5-201ENST00000602741 355 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AL773545.4-201ENST00000637262 310 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 AL513478.4-201ENST00000641636 310 ntBASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KIAA1549Q9HCM3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AL606537.1-201ENST00000607258 2011 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 MFSD8-236ENST00000641509 4050 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 MIR1251-201ENST00000408552 70 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 NPM1P34-201ENST00000428821 893 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 HMGN2P31-201ENST00000432430 273 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 ARL4AP4-201ENST00000434170 518 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AL353748.1-201ENST00000440753 474 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 YWHAQP9-201ENST00000445891 512 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AC002553.2-201ENST00000453217 340 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 RPS26P15-201ENST00000488067 348 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AL133372.1-201ENST00000493565 745 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AL139099.1-201ENST00000497398 403 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AL133457.1-201ENST00000564251 987 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 CYP4A43P-201ENST00000568156 121 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AL356121.2-201ENST00000624715 780 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 MTCO1P22-201ENST00000604619 1360 ntBASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
KIAA1549Q9HCM3 AL672167.2-201ENST00000377164 879 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 MIR670-201ENST00000390142 98 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC002524.1-201ENST00000411687 547 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 IGHV3-63-201ENST00000518422 341 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC022695.1-201ENST00000522089 237 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 AC015813.4-201ENST00000610469 179 ntBASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
KIAA1549Q9HCM3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms