Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
IFT140Q96RY7 AL133383.2-201ENST00000622958 2336 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
IFT140Q96RY7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 U3.23-201ENST00000391132 200 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 BX119904.3-201ENST00000428194 957 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 RN7SL429P-201ENST00000479090 223 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 RN7SL489P-201ENST00000486185 223 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 RN7SL327P-201ENST00000488659 223 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
IFT140Q96RY7 AC008802.1-201ENST00000519121 791 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 SNORA62.6-201ENST00000606322 83 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 RN7SL853P-201ENST00000617250 223 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
IFT140Q96RY7 MUC2-202ENST00000613187 4845 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
IFT140Q96RY7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
IFT140Q96RY7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
IFT140Q96RY7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
IFT140Q96RY7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 SNORD96B-201ENST00000386148 79 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 HMGN2P27-201ENST00000427352 270 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 OR4A12P-201ENST00000530847 918 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 MIR4672-201ENST00000583126 81 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 AC133552.5-201ENST00000604266 540 ntBASIC6.28□□□□□ -1.4
IFT140Q96RY7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.28□□□□□ -1.4
IFT140Q96RY7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
IFT140Q96RY7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
IFT140Q96RY7 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.27□□□□□ -1.41
IFT140Q96RY7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC6.27□□□□□ -1.41
IFT140Q96RY7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.27□□□□□ -1.41
IFT140Q96RY7 HMGB1P37-201ENST00000439613 609 ntBASIC6.27□□□□□ -1.41
IFT140Q96RY7 AL031584.1-201ENST00000447169 754 ntBASIC6.27□□□□□ -1.41
IFT140Q96RY7 SETP4-201ENST00000455717 868 ntBASIC6.27□□□□□ -1.41
IFT140Q96RY7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.27□□□□□ -1.41
IFT140Q96RY7 AC006511.1-201ENST00000470614 315 ntBASIC6.27□□□□□ -1.41
IFT140Q96RY7 AC020893.1-201ENST00000502452 580 ntBASIC6.27□□□□□ -1.41
IFT140Q96RY7 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.27□□□□□ -1.41
IFT140Q96RY7 RAC1P2-201ENST00000511164 579 ntBASIC6.27□□□□□ -1.41
IFT140Q96RY7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.27□□□□□ -1.41
IFT140Q96RY7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.27□□□□□ -1.41
IFT140Q96RY7 AC125494.3-201ENST00000602759 455 ntBASIC6.27□□□□□ -1.41
IFT140Q96RY7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.27□□□□□ -1.41
IFT140Q96RY7 AL731532.2-201ENST00000623542 1953 ntBASIC6.27□□□□□ -1.41
IFT140Q96RY7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
IFT140Q96RY7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.26□□□□□ -1.41
IFT140Q96RY7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC6.26□□□□□ -1.41
IFT140Q96RY7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
IFT140Q96RY7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
IFT140Q96RY7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
IFT140Q96RY7 SKP1P3-201ENST00000429280 487 ntBASIC6.26□□□□□ -1.41
IFT140Q96RY7 AC087650.1-201ENST00000431445 468 ntBASIC6.26□□□□□ -1.41
IFT140Q96RY7 RPL21P10-201ENST00000463521 490 ntBASIC6.26□□□□□ -1.41
IFT140Q96RY7 PRELID3BP6-201ENST00000503839 571 ntBASIC6.26□□□□□ -1.41
IFT140Q96RY7 PHBP14-201ENST00000512887 367 ntBASIC6.26□□□□□ -1.41
IFT140Q96RY7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC6.26□□□□□ -1.41
IFT140Q96RY7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC6.26□□□□□ -1.41
IFT140Q96RY7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.26□□□□□ -1.41
IFT140Q96RY7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
IFT140Q96RY7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6.25□□□□□ -1.41
IFT140Q96RY7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
IFT140Q96RY7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
IFT140Q96RY7 RSL24D1P3-201ENST00000449255 495 ntBASIC6.25□□□□□ -1.41
IFT140Q96RY7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.25□□□□□ -1.41
IFT140Q96RY7 RPS27AP1-201ENST00000475545 471 ntBASIC6.25□□□□□ -1.41
IFT140Q96RY7 RPL7P24-201ENST00000493052 752 ntBASIC6.25□□□□□ -1.41
IFT140Q96RY7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC6.25□□□□□ -1.41
IFT140Q96RY7 AC069306.1-201ENST00000507006 843 ntBASIC6.25□□□□□ -1.41
IFT140Q96RY7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.25□□□□□ -1.41
IFT140Q96RY7 AC009303.3-201ENST00000591103 736 ntBASIC6.25□□□□□ -1.41
IFT140Q96RY7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.25□□□□□ -1.41
IFT140Q96RY7 AL354760.1-201ENST00000608357 643 ntBASIC6.25□□□□□ -1.41
IFT140Q96RY7 AC010266.2-201ENST00000564741 3255 ntBASIC6.25□□□□□ -1.41
IFT140Q96RY7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
IFT140Q96RY7 AL513548.1-201ENST00000562904 1724 ntBASIC6.25□□□□□ -1.41
IFT140Q96RY7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
IFT140Q96RY7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
IFT140Q96RY7 AL353743.1-202ENST00000431724 1695 ntBASIC6.24□□□□□ -1.41
IFT140Q96RY7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
IFT140Q96RY7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.24□□□□□ -1.41
IFT140Q96RY7 Z95327.2-201ENST00000414579 1873 ntBASIC6.24□□□□□ -1.41
IFT140Q96RY7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
IFT140Q96RY7 RNA5SP374-201ENST00000362939 125 ntBASIC6.24□□□□□ -1.41
IFT140Q96RY7 AL603766.1-201ENST00000407763 664 ntBASIC6.24□□□□□ -1.41
IFT140Q96RY7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.24□□□□□ -1.41
IFT140Q96RY7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.24□□□□□ -1.41
IFT140Q96RY7 UBE2V1P1-201ENST00000430836 445 ntBASIC6.24□□□□□ -1.41
IFT140Q96RY7 AC127537.2-201ENST00000439258 465 ntBASIC6.24□□□□□ -1.41
IFT140Q96RY7 SNORA70.18-201ENST00000516696 98 ntBASIC6.24□□□□□ -1.41
IFT140Q96RY7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms