Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC011493.1-201ENST00000596753 1632 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 HSPE1P11-201ENST00000339579 310 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 RN7SKP63-201ENST00000363187 301 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 U3.12-201ENST00000364498 214 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 MIR27A-201ENST00000385073 78 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 RN7SKP131-201ENST00000410698 301 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 FDPSP6-201ENST00000425091 512 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 MTND3P2-201ENST00000438452 342 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 MEMO1P4-201ENST00000453590 386 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 FGF7P3-201ENST00000454645 303 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AL590639.1-201ENST00000456484 337 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC104164.1-201ENST00000460282 590 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AL136126.1-201ENST00000473603 402 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC126389.1-201ENST00000477436 290 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 RN7SL259P-201ENST00000478499 253 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 RPL21P99-201ENST00000480369 423 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC010409.2-201ENST00000505780 478 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 LINC01085-203ENST00000511195 326 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC016559.1-201ENST00000511420 199 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 TTC39CP1-201ENST00000512513 755 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 CYCSP22-201ENST00000517555 339 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 SUMO2P20-201ENST00000520803 283 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AP006587.5-201ENST00000532033 739 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 MIR4433B-201ENST00000581329 102 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC108451.2-201ENST00000603875 538 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC009597.2-201ENST00000604659 592 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC104184.1-201ENST00000607513 721 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC004908.2-201ENST00000609090 574 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC245517.5-201ENST00000611529 162 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 MIR6864-201ENST00000617935 70 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC040168.1-201ENST00000623594 991 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC027559.1-201ENST00000636288 271 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 AC009220.2-201ENST00000489759 1751 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 GNL2P1-201ENST00000451274 2190 ntBASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
DEPDC4Q8N2C3 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 RNU5E-8P-201ENST00000363502 116 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 Y_RNA.144-201ENST00000363521 113 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 RN7SKP36-201ENST00000363997 312 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 RNA5SP396-201ENST00000364834 120 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 SNORA33.2-201ENST00000365413 134 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 RNU6-38P-201ENST00000384085 107 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 RPL5P18-201ENST00000406671 891 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AL358176.3-201ENST00000420757 454 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC239367.3-201ENST00000428996 814 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AL138799.3-201ENST00000438968 350 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC239800.1-201ENST00000442049 719 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 PMS2P11-201ENST00000451831 574 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 RNU7-182P-201ENST00000459009 62 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 RNU6-333P-201ENST00000459117 107 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 RPL7L1P8-201ENST00000469911 741 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC022415.1-202ENST00000486612 523 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 Y_RNA.711-201ENST00000516993 102 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.47□□□□□ -1.37
DEPDC4Q8N2C3 AC092375.1-201ENST00000550410 637 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms