Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AP001486.2-201ENST00000561652 5113 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 FAR2P2-201ENST00000413041 594 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AC093698.1-201ENST00000423843 571 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 FAR2P4-202ENST00000425399 584 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 FABP3P2-201ENST00000453169 399 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 RPL38P1-201ENST00000460914 211 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 PPIAP21-201ENST00000464473 501 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AP000926.1-201ENST00000479573 241 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AC106872.2-201ENST00000494303 480 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 KRT19P6-201ENST00000510983 209 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 IGKV2-38-201ENST00000517443 247 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AC007599.1-201ENST00000568688 1174 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AC079171.1-201ENST00000568788 914 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AC023575.1-201ENST00000580510 358 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 MIR5684-201ENST00000585074 65 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AC011477.5-201ENST00000586571 259 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AL451044.1-201ENST00000604867 238 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 AL023583.1-201ENST00000607518 1143 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 MIR4727-201ENST00000622232 55 ntBASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC65Q8IXS2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC007685.1-201ENST00000329806 452 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 SNORA60-201ENST00000362396 134 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 SNORD35B-201ENST00000363660 87 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AL136131.1-201ENST00000406079 803 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 SNORA11B-201ENST00000408175 129 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 RN7SKP177-201ENST00000410567 355 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC108032.1-201ENST00000416706 207 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 FTH1P6-201ENST00000430768 320 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AL358472.1-201ENST00000431295 329 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 TPTE2P1-204ENST00000435256 593 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 NUTF2P3-201ENST00000448540 384 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 RPL31P53-201ENST00000457065 348 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC037198.2-201ENST00000478845 733 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 HPRT1P2-201ENST00000505250 544 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 OR7E10P-201ENST00000526420 991 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 EIF1AXP2-201ENST00000555940 413 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC025627.2-201ENST00000576220 160 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 KPNA2P3-201ENST00000584190 848 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC114878.2-201ENST00000604863 1251 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC012603.1-201ENST00000606424 528 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AC012213.4-201ENST00000606457 354 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AL445423.1-201ENST00000609941 536 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 MLECP1-201ENST00000615893 709 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 AL136964.1-201ENST00000622038 2990 ntBASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC65Q8IXS2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 AC009313.2-201ENST00000417893 1941 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 RPS27AP11-201ENST00000402798 447 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 RN7SKP33-201ENST00000410942 340 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 RPL7P53-201ENST00000421245 739 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 COX6CP15-201ENST00000426313 211 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 AC016712.1-201ENST00000431088 378 ntBASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC65Q8IXS2 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms