Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC092902.1-201ENST00000486999 259 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.52□□□□□ -1.69
HNF4AP41235 DEFB109F-201ENST00000491870 277 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 IGBP1P5-201ENST00000507524 1000 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.52□□□□□ -1.69
HNF4AP41235 AC010374.2-201ENST00000512933 535 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.52□□□□□ -1.69
HNF4AP41235 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.52□□□□□ -1.69
HNF4AP41235 RN7SKP96-201ENST00000516948 297 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.52□□□□□ -1.69
HNF4AP41235 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 SOX5P1-201ENST00000524155 1127 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AP003102.1-201ENST00000525638 661 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.52□□□□□ -1.69
HNF4AP41235 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.52□□□□□ -1.69
HNF4AP41235 OSBPL9P3-201ENST00000534523 595 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.52□□□□□ -1.69
HNF4AP41235 AL442163.2-201ENST00000553912 710 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.52□□□□□ -1.69
HNF4AP41235 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.52□□□□□ -1.69
HNF4AP41235 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.52□□□□□ -1.69
HNF4AP41235 AC015912.2-201ENST00000571053 181 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.52□□□□□ -1.69
HNF4AP41235 AC126365.2-201ENST00000580630 379 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 EIF1P6-201ENST00000600054 334 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AL512782.1-201ENST00000603093 364 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 FRG1HP-204ENST00000617940 757 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 MIR6853-201ENST00000619642 74 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 AC138907.10-201ENST00000623708 983 ntBASIC4.52□□□□□ -1.69
HNF4AP41235 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.52□□□□□ -1.69
HNF4AP41235 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HNF4AP41235 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HNF4AP41235 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HNF4AP41235 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HNF4AP41235 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.52□□□□□ -1.69
HNF4AP41235 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HNF4AP41235 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 AC108751.5-201ENST00000492880 1336 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 OR11H5P-202ENST00000641612 1325 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.51□□□□□ -1.69
HNF4AP41235 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.51□□□□□ -1.69
HNF4AP41235 SDAD1P1-202ENST00000524156 2051 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HNF4AP41235 AL590240.1-201ENST00000334118 313 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 RNA5SP27-201ENST00000363839 119 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 RNA5SP28-201ENST00000363841 119 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 DNAJC19P6-201ENST00000401853 280 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.51□□□□□ -1.69
HNF4AP41235 VDAC1P9-201ENST00000412766 841 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 RPL21P108-201ENST00000413857 481 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 AC009237.10-201ENST00000414112 510 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.51□□□□□ -1.69
HNF4AP41235 BX510359.2-201ENST00000417920 305 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 AC004690.1-201ENST00000418216 328 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 AL354692.1-201ENST00000423044 315 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
HNF4AP41235 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.51□□□□□ -1.69
HNF4AP41235 AC006466.1-201ENST00000438721 289 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 RNFT1P2-201ENST00000443064 757 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 Z80107.2-201ENST00000445127 392 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 PPIAP3-201ENST00000450588 505 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 AC092324.1-201ENST00000468671 324 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 AC098799.3-201ENST00000506095 438 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 STMN1P2-201ENST00000508435 439 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.51□□□□□ -1.69
HNF4AP41235 GSTP1P1-201ENST00000548078 319 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.51□□□□□ -1.69
HNF4AP41235 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.51□□□□□ -1.69
HNF4AP41235 UBE2FP2-201ENST00000566646 462 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.51□□□□□ -1.69
HNF4AP41235 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.51□□□□□ -1.69
HNF4AP41235 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.51□□□□□ -1.69
HNF4AP41235 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.51□□□□□ -1.69
HNF4AP41235 AL445493.3-201ENST00000619568 477 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 MIR6730-201ENST00000622213 67 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.51□□□□□ -1.69
HNF4AP41235 AC017104.5-201ENST00000637647 639 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.51□□□□□ -1.69
HNF4AP41235 AL133243.3-201ENST00000617415 3004 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 AC010928.1-201ENST00000592477 1447 ntBASIC4.51□□□□□ -1.69
HNF4AP41235 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
HNF4AP41235 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.51□□□□□ -1.69
HNF4AP41235 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.51□□□□□ -1.69
HNF4AP41235 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HNF4AP41235 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
HNF4AP41235 AL355852.1-201ENST00000454081 1771 ntBASIC4.5□□□□□ -1.69
HNF4AP41235 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.5□□□□□ -1.69
HNF4AP41235 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HNF4AP41235 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HNF4AP41235 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
HNF4AP41235 MTCO1P14-201ENST00000441695 1559 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms