Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC087283.1-201ENST00000604029 1074 ntBASIC4.8□□□□□ -1.64
HADHAP40939 COX6CP4-201ENST00000605798 228 ntBASIC4.8□□□□□ -1.64
HADHAP40939 AC112503.1-201ENST00000608436 391 ntBASIC4.8□□□□□ -1.64
HADHAP40939 AL391834.2-201ENST00000609982 546 ntBASIC4.8□□□□□ -1.64
HADHAP40939 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HADHAP40939 AL353726.1-201ENST00000614041 1000 ntBASIC4.8□□□□□ -1.64
HADHAP40939 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HADHAP40939 AC000123.2-201ENST00000623124 461 ntBASIC4.8□□□□□ -1.64
HADHAP40939 AC004808.1-201ENST00000627671 721 ntBASIC4.8□□□□□ -1.64
HADHAP40939 AC013437.2-201ENST00000639587 677 ntBASIC4.8□□□□□ -1.64
HADHAP40939 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.8□□□□□ -1.64
HADHAP40939 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HADHAP40939 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
HADHAP40939 NCLP2-201ENST00000416078 1462 ntBASIC4.8□□□□□ -1.64
HADHAP40939 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.8□□□□□ -1.64
HADHAP40939 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HADHAP40939 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.79□□□□□ -1.64
HADHAP40939 AC015813.6-201ENST00000624409 5808 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AL672167.1-205ENST00000641112 3080 ntBASIC4.79□□□□□ -1.64
HADHAP40939 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.79□□□□□ -1.64
HADHAP40939 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.79□□□□□ -1.64
HADHAP40939 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.79□□□□□ -1.64
HADHAP40939 RNA5SP87-201ENST00000384155 118 ntBASIC4.79□□□□□ -1.64
HADHAP40939 RNU6-925P-201ENST00000384629 104 ntBASIC4.79□□□□□ -1.64
HADHAP40939 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 HSPD1P16-201ENST00000402302 394 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AL080315.1-201ENST00000406055 466 ntBASIC4.79□□□□□ -1.64
HADHAP40939 HNRNPDP2-201ENST00000406475 478 ntBASIC4.79□□□□□ -1.64
HADHAP40939 FABP7P1-201ENST00000424004 391 ntBASIC4.79□□□□□ -1.64
HADHAP40939 CEACAMP1-201ENST00000434624 1035 ntBASIC4.79□□□□□ -1.64
HADHAP40939 ELOCP11-201ENST00000436690 332 ntBASIC4.79□□□□□ -1.64
HADHAP40939 ELOCP16-201ENST00000444494 332 ntBASIC4.79□□□□□ -1.64
HADHAP40939 OR1H1P-201ENST00000448731 937 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.79□□□□□ -1.64
HADHAP40939 AC073522.1-201ENST00000483312 377 ntBASIC4.79□□□□□ -1.64
HADHAP40939 HMGB1P38-201ENST00000490557 577 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AC104971.1-201ENST00000495117 578 ntBASIC4.79□□□□□ -1.64
HADHAP40939 RPL30P11-201ENST00000495304 339 ntBASIC4.79□□□□□ -1.64
HADHAP40939 ARL4AP1-201ENST00000503220 705 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AC069306.1-201ENST00000507006 843 ntBASIC4.79□□□□□ -1.64
HADHAP40939 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.79□□□□□ -1.64
HADHAP40939 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.79□□□□□ -1.64
HADHAP40939 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.79□□□□□ -1.64
HADHAP40939 AC133555.2-201ENST00000550213 292 ntBASIC4.79□□□□□ -1.64
HADHAP40939 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.79□□□□□ -1.64
HADHAP40939 OR4U1P-201ENST00000554958 912 ntBASIC4.79□□□□□ -1.64
HADHAP40939 CYP2C60P-201ENST00000566088 139 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.79□□□□□ -1.64
HADHAP40939 MIR5699-201ENST00000578903 90 ntBASIC4.79□□□□□ -1.64
HADHAP40939 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.79□□□□□ -1.64
HADHAP40939 AC009948.4-201ENST00000604692 675 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AL392112.1-201ENST00000605115 829 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AC018754.1-201ENST00000607486 925 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AC013468.1-201ENST00000608680 598 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AC093673.2-201ENST00000609674 331 ntBASIC4.79□□□□□ -1.64
HADHAP40939 FAM27B-201ENST00000610601 213 ntBASIC4.79□□□□□ -1.64
HADHAP40939 MIR6820-201ENST00000611508 62 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AC140113.4-201ENST00000622087 222 ntBASIC4.79□□□□□ -1.64
HADHAP40939 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.79□□□□□ -1.64
HADHAP40939 AC091953.3-201ENST00000623220 236 ntBASIC4.79□□□□□ -1.64
HADHAP40939 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.79□□□□□ -1.64
HADHAP40939 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.79□□□□□ -1.64
HADHAP40939 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HADHAP40939 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HADHAP40939 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
HADHAP40939 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.78□□□□□ -1.64
HADHAP40939 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HADHAP40939 IRF5P1-201ENST00000504852 2164 ntBASIC4.78□□□□□ -1.64
HADHAP40939 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HADHAP40939 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.78□□□□□ -1.64
HADHAP40939 OR56B2P-201ENST00000317102 954 ntBASIC4.78□□□□□ -1.64
HADHAP40939 RN7SKP115-201ENST00000363177 317 ntBASIC4.78□□□□□ -1.64
HADHAP40939 U3.30-201ENST00000391308 210 ntBASIC4.78□□□□□ -1.64
HADHAP40939 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HADHAP40939 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HADHAP40939 MTND2P15-201ENST00000418575 892 ntBASIC4.78□□□□□ -1.64
HADHAP40939 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.78□□□□□ -1.64
HADHAP40939 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.78□□□□□ -1.64
HADHAP40939 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HADHAP40939 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.78□□□□□ -1.64
HADHAP40939 TDGF1P1-201ENST00000445734 527 ntBASIC4.78□□□□□ -1.64
HADHAP40939 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.78□□□□□ -1.64
HADHAP40939 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HADHAP40939 FTH1P24-201ENST00000503502 462 ntBASIC4.78□□□□□ -1.64
HADHAP40939 TCP11X3P-202ENST00000514289 1254 ntBASIC4.78□□□□□ -1.64
HADHAP40939 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.78□□□□□ -1.64
HADHAP40939 IGJP1-201ENST00000522682 475 ntBASIC4.78□□□□□ -1.64
HADHAP40939 AC139103.1-201ENST00000534696 1030 ntBASIC4.78□□□□□ -1.64
HADHAP40939 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.78□□□□□ -1.64
HADHAP40939 RPL21P7-201ENST00000557463 483 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms