Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.22□□□□□ -1.73
HMGCLP35914 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCLP35914 MTND6P33-201ENST00000571794 183 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGCLP35914 MIR3138-201ENST00000585238 82 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 IPO5P1-202ENST00000600039 287 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 AC068790.5-201ENST00000602741 355 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 AC123786.2-201ENST00000603459 275 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.22□□□□□ -1.73
HMGCLP35914 AL133445.2-201ENST00000611191 527 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 AL669942.2-201ENST00000620352 697 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 AC138907.10-201ENST00000623708 983 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 AP002371.2-201ENST00000624450 503 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 AC092159.4-201ENST00000624944 550 ntBASIC4.22□□□□□ -1.73
HMGCLP35914 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.22□□□□□ -1.73
HMGCLP35914 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.22□□□□□ -1.73
HMGCLP35914 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCLP35914 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCLP35914 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCLP35914 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCLP35914 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HMGCLP35914 CYP1D1P-201ENST00000416662 1433 ntBASIC4.21□□□□□ -1.73
HMGCLP35914 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HMGCLP35914 AC110792.3-201ENST00000595906 1614 ntBASIC4.21□□□□□ -1.73
HMGCLP35914 AC009229.4-201ENST00000623854 1947 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HMGCLP35914 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGCLP35914 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCLP35914 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGCLP35914 AC126755.2-208ENST00000327792 462 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AC138969.1-213ENST00000331436 462 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 RNA5SP443-201ENST00000363083 132 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCLP35914 RNU6-146P-201ENST00000384602 108 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 MIR141-201ENST00000384975 95 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 OR6C69P-201ENST00000394268 893 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AL161909.1-201ENST00000397390 712 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 RN7SKP182-201ENST00000410772 298 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGCLP35914 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCLP35914 AC073508.1-201ENST00000428866 656 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 DYNLL1P7-201ENST00000429273 258 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AC022022.1-201ENST00000430304 178 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCLP35914 MTND2P25-201ENST00000449028 610 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 RNA5SP246-201ENST00000458909 119 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AC104629.2-201ENST00000468627 598 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.21□□□□□ -1.74
HMGCLP35914 AC025445.1-201ENST00000502728 300 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AC108475.1-201ENST00000507880 950 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AC006499.6-201ENST00000511169 607 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AC099522.1-202ENST00000514718 367 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AP003049.1-201ENST00000529418 457 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCLP35914 CKS1BP1-201ENST00000555221 240 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 TVP23BP1-201ENST00000557500 617 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 MIR3908-201ENST00000579798 126 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCLP35914 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.21□□□□□ -1.74
HMGCLP35914 MTCO3P22-201ENST00000603219 784 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 MTCO2P22-201ENST00000603246 681 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 MIR432-201ENST00000606207 94 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGCLP35914 AL445423.1-201ENST00000609941 536 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AC116447.1-201ENST00000613153 453 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AL512506.1-201ENST00000613918 449 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AL445567.2-201ENST00000618935 498 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 MIR7702-201ENST00000621931 59 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGCLP35914 AC134882.1-201ENST00000603738 1676 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.21□□□□□ -1.74
HMGCLP35914 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
HMGCLP35914 AC092162.3-201ENST00000624511 1624 ntBASIC4.21□□□□□ -1.74
HMGCLP35914 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCLP35914 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HMGCLP35914 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HMGCLP35914 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HMGCLP35914 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HMGCLP35914 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCLP35914 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HMGCLP35914 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HMGCLP35914 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.2□□□□□ -1.74
HMGCLP35914 MIR383-201ENST00000362257 73 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 RNA5SP52-201ENST00000362448 134 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 SNORD115-48-201ENST00000364764 76 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCLP35914 AL034403.1-201ENST00000399414 885 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCLP35914 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.2□□□□□ -1.74
HMGCLP35914 DPY19L1P2-201ENST00000426647 915 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 BX119904.1-201ENST00000432026 348 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 RPS6P12-201ENST00000432491 726 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.2□□□□□ -1.74
HMGCLP35914 RPL23AP46-201ENST00000438548 490 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 RPL23AP89-201ENST00000439324 255 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCLP35914 RAD23BP3-201ENST00000454157 1152 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HMGCLP35914 AC109327.1-201ENST00000471666 403 ntBASIC4.2□□□□□ -1.74
HMGCLP35914 S100A11P1-201ENST00000477525 312 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms