Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ELOCP19-201ENST00000411919 318 ntBASIC5.15□□□□□ -1.59
CIITAP33076 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.15□□□□□ -1.59
CIITAP33076 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.15□□□□□ -1.59
CIITAP33076 KRR1P1-201ENST00000419430 803 ntBASIC5.15□□□□□ -1.59
CIITAP33076 EIF4A1P1-201ENST00000420241 934 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.15□□□□□ -1.59
CIITAP33076 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CIITAP33076 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.15□□□□□ -1.59
CIITAP33076 AC092648.1-201ENST00000425870 423 ntBASIC5.15□□□□□ -1.59
CIITAP33076 DPY19L1P2-201ENST00000426647 915 ntBASIC5.15□□□□□ -1.59
CIITAP33076 CNOT7P1-201ENST00000429006 852 ntBASIC5.15□□□□□ -1.59
CIITAP33076 RPL12P28-201ENST00000430852 489 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AC005189.1-201ENST00000431286 310 ntBASIC5.15□□□□□ -1.59
CIITAP33076 RPL23AP93-201ENST00000440847 484 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.15□□□□□ -1.59
CIITAP33076 AL591719.1-201ENST00000444669 744 ntBASIC5.15□□□□□ -1.59
CIITAP33076 RPL23AP43-201ENST00000446445 471 ntBASIC5.15□□□□□ -1.59
CIITAP33076 ARL2BPP10-201ENST00000446487 531 ntBASIC5.15□□□□□ -1.59
CIITAP33076 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CIITAP33076 AC008280.2-201ENST00000455473 307 ntBASIC5.15□□□□□ -1.59
CIITAP33076 snoU13.1-201ENST00000459157 104 ntBASIC5.15□□□□□ -1.59
CIITAP33076 RN7SL459P-201ENST00000481078 302 ntBASIC5.15□□□□□ -1.59
CIITAP33076 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.15□□□□□ -1.59
CIITAP33076 AC107398.1-201ENST00000486904 505 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.15□□□□□ -1.59
CIITAP33076 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.15□□□□□ -1.59
CIITAP33076 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CIITAP33076 AC108471.1-201ENST00000513977 287 ntBASIC5.15□□□□□ -1.59
CIITAP33076 RNA5SP446-201ENST00000515955 82 ntBASIC5.15□□□□□ -1.59
CIITAP33076 HIGD1AP18-201ENST00000520730 278 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.15□□□□□ -1.59
CIITAP33076 MTATP6P15-201ENST00000527233 835 ntBASIC5.15□□□□□ -1.59
CIITAP33076 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CIITAP33076 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.15□□□□□ -1.59
CIITAP33076 AC068831.4-201ENST00000556118 109 ntBASIC5.15□□□□□ -1.59
CIITAP33076 VN1R87P-201ENST00000596706 487 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AC025175.1-201ENST00000606482 759 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AC012557.1-201ENST00000607115 611 ntBASIC5.15□□□□□ -1.59
CIITAP33076 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.15□□□□□ -1.59
CIITAP33076 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.15□□□□□ -1.59
CIITAP33076 AL136295.6-201ENST00000610486 658 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AC022079.2-201ENST00000619739 566 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AC011330.2-201ENST00000621680 635 ntBASIC5.15□□□□□ -1.59
CIITAP33076 AC004777.1-201ENST00000624317 287 ntBASIC5.15□□□□□ -1.59
CIITAP33076 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.15□□□□□ -1.59
CIITAP33076 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
CIITAP33076 A2MP1-204ENST00000566278 4130 ntBASIC5.15□□□□□ -1.59
CIITAP33076 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CIITAP33076 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.15□□□□□ -1.59
CIITAP33076 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.15□□□□□ -1.59
CIITAP33076 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CIITAP33076 DDX18P4-201ENST00000511690 1966 ntBASIC5.15□□□□□ -1.59
CIITAP33076 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CIITAP33076 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CIITAP33076 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.14□□□□□ -1.59
CIITAP33076 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CIITAP33076 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CIITAP33076 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CIITAP33076 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CIITAP33076 RNU4-40P-201ENST00000364351 143 ntBASIC5.14□□□□□ -1.59
CIITAP33076 RNU6-906P-201ENST00000384700 70 ntBASIC5.14□□□□□ -1.59
CIITAP33076 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CIITAP33076 RN7SKP97-201ENST00000410966 333 ntBASIC5.14□□□□□ -1.59
CIITAP33076 FAR2P2-201ENST00000413041 594 ntBASIC5.14□□□□□ -1.59
CIITAP33076 AL807761.1-201ENST00000417622 171 ntBASIC5.14□□□□□ -1.59
CIITAP33076 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.14□□□□□ -1.59
CIITAP33076 AL449283.1-202ENST00000418249 604 ntBASIC5.14□□□□□ -1.59
CIITAP33076 MTCO2P21-201ENST00000419780 677 ntBASIC5.14□□□□□ -1.59
CIITAP33076 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CIITAP33076 RPL7AP25-201ENST00000423357 805 ntBASIC5.14□□□□□ -1.59
CIITAP33076 FAR2P4-202ENST00000425399 584 ntBASIC5.14□□□□□ -1.59
CIITAP33076 CENPIP1-201ENST00000425713 902 ntBASIC5.14□□□□□ -1.59
CIITAP33076 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CIITAP33076 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.14□□□□□ -1.59
CIITAP33076 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CIITAP33076 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.14□□□□□ -1.59
CIITAP33076 Z73417.1-201ENST00000447373 778 ntBASIC5.14□□□□□ -1.59
CIITAP33076 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.14□□□□□ -1.59
CIITAP33076 AL096803.2-201ENST00000450032 677 ntBASIC5.14□□□□□ -1.59
CIITAP33076 Z95152.1-201ENST00000453556 656 ntBASIC5.14□□□□□ -1.59
CIITAP33076 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.14□□□□□ -1.59
CIITAP33076 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.14□□□□□ -1.59
CIITAP33076 RPL7AP52-201ENST00000458096 790 ntBASIC5.14□□□□□ -1.59
CIITAP33076 AC108751.2-201ENST00000469993 231 ntBASIC5.14□□□□□ -1.59
CIITAP33076 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CIITAP33076 AC026414.1-201ENST00000504046 698 ntBASIC5.14□□□□□ -1.59
CIITAP33076 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.14□□□□□ -1.59
CIITAP33076 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.14□□□□□ -1.59
CIITAP33076 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.14□□□□□ -1.59
CIITAP33076 RNU6-311P-201ENST00000516224 102 ntBASIC5.14□□□□□ -1.59
CIITAP33076 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.14□□□□□ -1.59
CIITAP33076 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.14□□□□□ -1.59
CIITAP33076 AC027455.1-201ENST00000574104 594 ntBASIC5.14□□□□□ -1.59
CIITAP33076 AC022884.3-201ENST00000579571 248 ntBASIC5.14□□□□□ -1.59
CIITAP33076 BPIFA4P-203ENST00000603168 689 ntBASIC5.14□□□□□ -1.59
CIITAP33076 AC073387.2-201ENST00000604797 784 ntBASIC5.14□□□□□ -1.59
CIITAP33076 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CIITAP33076 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.14□□□□□ -1.59
CIITAP33076 MIR7641-1-201ENST00000627518 61 ntBASIC5.14□□□□□ -1.59
CIITAP33076 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms