Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 GLULP6-201ENST00000399502 913 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AL049697.2-201ENST00000403708 294 ntBASIC4.51□□□□□ -1.69
CDH3P22223 ATF1P1-201ENST00000406040 927 ntBASIC4.51□□□□□ -1.69
CDH3P22223 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH3P22223 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH3P22223 AL807761.1-201ENST00000417622 171 ntBASIC4.51□□□□□ -1.69
CDH3P22223 MTCO3P4-201ENST00000419236 787 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC023128.2-201ENST00000420880 1223 ntBASIC4.51□□□□□ -1.69
CDH3P22223 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.51□□□□□ -1.69
CDH3P22223 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 DNAJC19P7-201ENST00000428811 344 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC005189.1-201ENST00000431286 310 ntBASIC4.51□□□□□ -1.69
CDH3P22223 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 AC004938.1-201ENST00000438468 308 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 HMGB1P26-201ENST00000452520 628 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC133473.1-201ENST00000455173 299 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH3P22223 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 AC104763.1-201ENST00000475274 360 ntBASIC4.51□□□□□ -1.69
CDH3P22223 S100A11P1-201ENST00000477525 312 ntBASIC4.51□□□□□ -1.69
CDH3P22223 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 AC025164.1-201ENST00000496249 478 ntBASIC4.51□□□□□ -1.69
CDH3P22223 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH3P22223 AC111000.3-201ENST00000508057 576 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 AC104115.2-201ENST00000523026 687 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 FKBP1BP1-201ENST00000553366 325 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.51□□□□□ -1.69
CDH3P22223 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH3P22223 AC124283.4-201ENST00000581815 456 ntBASIC4.51□□□□□ -1.69
CDH3P22223 SS18L2P2-201ENST00000583960 235 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC068790.7-201ENST00000602347 528 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC068620.3-201ENST00000602749 560 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC011374.2-201ENST00000607135 526 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AL121873.1-201ENST00000616013 524 ntBASIC4.51□□□□□ -1.69
CDH3P22223 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH3P22223 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDH3P22223 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDH3P22223 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH3P22223 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH3P22223 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CDH3P22223 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDH3P22223 AL139811.1-201ENST00000424779 2299 ntBASIC4.51□□□□□ -1.69
CDH3P22223 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH3P22223 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH3P22223 ZNF137P-201ENST00000456718 1920 ntBASIC4.5□□□□□ -1.69
CDH3P22223 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH3P22223 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CDH3P22223 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 AC012020.1-201ENST00000624541 1728 ntBASIC4.5□□□□□ -1.69
CDH3P22223 DHX40P1-201ENST00000588725 1412 ntBASIC4.5□□□□□ -1.69
CDH3P22223 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 RNA5SP332-201ENST00000391063 115 ntBASIC4.5□□□□□ -1.69
CDH3P22223 RSL24D1P1-201ENST00000404972 493 ntBASIC4.5□□□□□ -1.69
CDH3P22223 RPL31P52-201ENST00000407532 367 ntBASIC4.5□□□□□ -1.69
CDH3P22223 U3.35-201ENST00000408405 208 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 AC004552.1-201ENST00000419089 348 ntBASIC4.5□□□□□ -1.69
CDH3P22223 FO393414.1-201ENST00000428697 1184 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC068287.1-201ENST00000430283 295 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 AL645931.1-201ENST00000439737 410 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH3P22223 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH3P22223 AL645939.1-201ENST00000453429 797 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH3P22223 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 RPS26P3-201ENST00000470205 348 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC090543.2-201ENST00000483963 348 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC004057.1-201ENST00000485827 348 ntBASIC4.5□□□□□ -1.69
CDH3P22223 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH3P22223 AC002456.2-201ENST00000509356 380 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 RAB9BP1-201ENST00000519581 626 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH3P22223 AC008083.2-201ENST00000546707 476 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH3P22223 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH3P22223 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH3P22223 MTND6P33-201ENST00000571794 183 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH3P22223 AC008638.3-201ENST00000603341 463 ntBASIC4.5□□□□□ -1.69
CDH3P22223 AL133338.2-201ENST00000604292 736 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms