Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TRGV7-201ENST00000427089 353 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 UBE2V2P3-201ENST00000433562 437 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 RNA5SP246-201ENST00000458909 119 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC023632.4-201ENST00000517783 191 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC090953.1-201ENST00000604305 1092 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC092162.3-201ENST00000624511 1624 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC017007.4-201ENST00000503353 1352 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 RNA5SP130-201ENST00000364431 114 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 PTMAP2-201ENST00000397627 327 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL078604.1-201ENST00000404609 466 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC009302.1-201ENST00000417147 390 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL391219.1-201ENST00000422570 483 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 RBMY1KP-201ENST00000423480 476 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 SNRPFP2-201ENST00000440710 251 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 MTCYBP14-201ENST00000457471 715 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 RPL7P15-201ENST00000461190 712 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 SEPT7P6-201ENST00000469999 1143 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 MTND3P6-201ENST00000485242 339 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 RN7SL604P-201ENST00000492589 296 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 NPM1P41-201ENST00000512920 831 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL360157.1-201ENST00000565962 87 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR4429-201ENST00000580105 73 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC090312.1-201ENST00000580637 348 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC009303.3-201ENST00000591103 736 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC107905.1-201ENST00000616204 426 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC006133.1-201ENST00000617106 264 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR6875-201ENST00000617506 72 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.06□□□□□ -1.76
TMX2-CTNND1H3BSU7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC097374.1-203ENST00000400783 485 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 RPL21P65-201ENST00000406094 466 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 JKAMPP1-201ENST00000413804 919 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC013268.2-201ENST00000420753 337 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL050321.1-201ENST00000432363 400 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 RRM2P4-201ENST00000441721 562 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 VN1R34P-201ENST00000447387 883 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 RNU7-157P-201ENST00000459600 66 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 RPL38P1-201ENST00000460914 211 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 VN1R105P-201ENST00000486595 910 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL133372.1-201ENST00000493565 745 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 SNORA67.7-201ENST00000516664 135 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC025857.1-201ENST00000525252 377 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 UBTFL9-201ENST00000534504 1148 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR3158-1-201ENST00000583596 81 ntBASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.05□□□□□ -1.76
TMX2-CTNND1H3BSU7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms