Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GTF2F2P1-201ENST00000511083 675 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC109445.1-201ENST00000512356 383 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 MTCO1P30-201ENST00000515244 580 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 MTATP6P15-201ENST00000527233 835 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN1Q9P244 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC009094.1-201ENST00000564443 426 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC138915.2-201ENST00000569776 97 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 AL354943.1-201ENST00000572103 781 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 OR4K7P-201ENST00000580232 945 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 MIR4436B2-201ENST00000581415 91 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 MIR4436B1-201ENST00000583272 91 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC006116.3-201ENST00000592968 361 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC113194.1-201ENST00000606037 500 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC091946.2-201ENST00000606105 291 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC015712.7-201ENST00000615211 635 ntBASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN1Q9P244 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN1Q9P244 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LRFN1Q9P244 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LRFN1Q9P244 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC002525.1-201ENST00000624392 1622 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 AP000776.1-201ENST00000530032 1663 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 AL139811.1-201ENST00000424779 2299 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 RNA5SP305-201ENST00000362665 119 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 RN7SKP103-201ENST00000363848 320 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 MIR600-201ENST00000385007 98 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AL589647.1-201ENST00000402485 466 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 AL139128.1-201ENST00000413921 941 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 NPM1P34-201ENST00000428821 893 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 RPL31P54-201ENST00000429803 370 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AL050321.1-201ENST00000432363 400 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 ATP5F1P1-201ENST00000433775 569 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 MTCYBP31-201ENST00000438855 1122 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 RPS23P9-201ENST00000448848 438 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC073850.1-201ENST00000449243 255 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 RPL7P31-201ENST00000450192 724 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 DNAJB5P1-201ENST00000454004 806 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC009127.1-201ENST00000467090 155 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 RPL5P22-201ENST00000480199 884 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC058823.1-201ENST00000485315 474 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 PGBD4P4-201ENST00000509673 613 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 RNA5SP373-201ENST00000517271 95 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 SULT1C2P1-202ENST00000562418 459 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 SNORD39.3-201ENST00000584451 71 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC009220.3-201ENST00000604318 586 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AL139124.1-201ENST00000609123 421 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 MIR6820-201ENST00000611508 62 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC121761.2-201ENST00000617300 689 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC048344.4-201ENST00000619744 527 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRFN1Q9P244 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC107982.1-201ENST00000507171 1300 ntBASIC4.87□□□□□ -1.63
LRFN1Q9P244 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
LRFN1Q9P244 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms