Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC011453.2-201ENST00000603737 729 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS50Q96JG6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 AC068870.2-201ENST00000620635 389 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 AP002505.2-201ENST00000623585 696 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
VPS50Q96JG6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS50Q96JG6 OR51H2P-202ENST00000641424 3046 ntBASIC5.04□□□□□ -1.6
VPS50Q96JG6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS50Q96JG6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS50Q96JG6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AL451142.2-201ENST00000429076 2090 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 RNA5SP305-201ENST00000362665 119 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 Y_RNA.465-201ENST00000384293 102 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 SNORD116-1-201ENST00000384335 95 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 MIR105-1-201ENST00000385222 81 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 RPL35AP24-201ENST00000413846 330 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 RPL6P29-201ENST00000414863 865 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 VN1R108P-201ENST00000431580 830 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 MTND1P32-201ENST00000433043 938 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 UBE2D3P1-201ENST00000436669 444 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AL117351.1-201ENST00000438864 766 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 RPL23AP76-201ENST00000441860 458 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 EEF1B2P5-201ENST00000444820 548 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC079776.3-201ENST00000450665 370 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 RPL7AP52-201ENST00000458096 790 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC079168.1-201ENST00000458741 345 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 RPS18P6-201ENST00000476880 458 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC126121.1-201ENST00000482313 553 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 RPS23P1-201ENST00000491662 432 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 RPS4XP20-201ENST00000505751 772 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC021146.8-201ENST00000507455 733 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 OR5H4P-201ENST00000510851 923 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC008837.2-201ENST00000513076 418 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AF186190.1-201ENST00000517470 480 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 MTCO1P47-201ENST00000523889 1271 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 GCSHP4-201ENST00000538792 439 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC010198.2-201ENST00000550612 259 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 NBEAP1-201ENST00000554452 979 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC109446.2-201ENST00000567872 497 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 MIR3912-201ENST00000577566 105 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC123786.2-201ENST00000603459 275 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC009027.1-201ENST00000604510 479 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC099676.1-201ENST00000608886 657 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 uc_338.9-201ENST00000617424 182 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC015914.2-201ENST00000618167 288 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 MIR6839-201ENST00000620425 113 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 MIR6719-201ENST00000622428 87 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC103706.2-201ENST00000638080 240 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 AC011493.1-201ENST00000596753 1632 ntBASIC5.03□□□□□ -1.6
VPS50Q96JG6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS50Q96JG6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS50Q96JG6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS50Q96JG6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 DCAF13P3-201ENST00000561147 1334 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS50Q96JG6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms