Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC115286.1-201ENST00000604298 434 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 AL161616.1-201ENST00000611867 286 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 AC009032.1-201ENST00000617574 431 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX4Q33E94 AL773545.4-201ENST00000637262 310 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RFX4Q33E94 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RFX4Q33E94 AL513478.4-201ENST00000641636 310 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
RFX4Q33E94 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 DHX40P1-201ENST00000588725 1412 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 Z82217.1-201ENST00000625157 8149 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX4Q33E94 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX4Q33E94 OR56B2P-202ENST00000641377 2453 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 NCAPGP1-201ENST00000505112 1814 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX4Q33E94 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX4Q33E94 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX4Q33E94 OR5P1P-201ENST00000299512 925 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 RNU6-225P-201ENST00000384613 103 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RFX4Q33E94 AL138878.1-201ENST00000405131 347 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 MIR1183-201ENST00000408856 89 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX4Q33E94 TMSB10P2-201ENST00000416049 131 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX4Q33E94 AC093698.1-201ENST00000423843 571 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX4Q33E94 MRPS33P4-201ENST00000434892 317 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX4Q33E94 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX4Q33E94 RPL7P31-201ENST00000450192 724 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 CALM1P2-201ENST00000452941 448 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 RN7SL354P-201ENST00000469282 294 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 RPL21P126-201ENST00000470049 478 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX4Q33E94 RN7SL271P-201ENST00000487601 295 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.86□□□□□ -1.79
RFX4Q33E94 RNU6-362P-201ENST00000516736 90 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX4Q33E94 AC092851.1-201ENST00000535964 478 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX4Q33E94 AC074029.2-201ENST00000551045 634 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX4Q33E94 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.86□□□□□ -1.79
RFX4Q33E94 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX4Q33E94 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX4Q33E94 AC068790.7-201ENST00000602347 528 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX4Q33E94 AC019131.2-201ENST00000609071 870 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AP000255.1-201ENST00000610276 676 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 uc_338.13-201ENST00000618243 179 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AC095038.2-201ENST00000621464 1070 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AC019080.5-201ENST00000624891 757 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFX4Q33E94 AC244205.2-202ENST00000635781 342 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 RAD17P1-201ENST00000418130 2042 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX4Q33E94 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.86□□□□□ -1.79
RFX4Q33E94 MARK2P15-201ENST00000432204 2186 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 AC106871.1-201ENST00000568324 3102 ntBASIC3.86□□□□□ -1.79
RFX4Q33E94 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX4Q33E94 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 AL592148.3-201ENST00000608771 2646 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RFX4Q33E94 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 OR5T3-201ENST00000303059 1023 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RFX4Q33E94 MIR331-201ENST00000362302 94 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.85□□□□□ -1.79
RFX4Q33E94 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 PGBD4P8-201ENST00000412993 562 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX4Q33E94 AL139128.1-201ENST00000413921 941 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 TRIM60P13-201ENST00000432350 1283 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 AC007563.3-201ENST00000433233 371 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.85□□□□□ -1.79
RFX4Q33E94 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.85□□□□□ -1.79
RFX4Q33E94 AL772161.1-201ENST00000439130 476 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 AL512326.1-201ENST00000443050 721 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 VN1R48P-201ENST00000448149 1036 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 AC073264.2-201ENST00000448886 166 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.85□□□□□ -1.79
RFX4Q33E94 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX4Q33E94 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.85□□□□□ -1.79
RFX4Q33E94 AC010627.1-201ENST00000503819 1294 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 HPRT1P2-201ENST00000505250 544 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 BTF3L4P4-201ENST00000506381 449 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX4Q33E94 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX4Q33E94 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.85□□□□□ -1.79
RFX4Q33E94 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms