Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SNORA71B-202ENST00000439232 272 ntBASIC3.35□□□□□ -1.87
LSM3P62310 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM3P62310 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM3P62310 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM3P62310 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM3P62310 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM3P62310 AC243772.1-201ENST00000451620 410 ntBASIC3.35□□□□□ -1.87
LSM3P62310 AL136097.1-201ENST00000456945 913 ntBASIC3.35□□□□□ -1.87
LSM3P62310 RPL6P9-201ENST00000466502 859 ntBASIC3.35□□□□□ -1.87
LSM3P62310 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM3P62310 RN7SL101P-201ENST00000496350 279 ntBASIC3.35□□□□□ -1.87
LSM3P62310 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
LSM3P62310 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.35□□□□□ -1.87
LSM3P62310 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.35□□□□□ -1.87
LSM3P62310 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM3P62310 RNA5SP179-201ENST00000517284 121 ntBASIC3.35□□□□□ -1.87
LSM3P62310 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM3P62310 CBX3P5-201ENST00000552017 521 ntBASIC3.35□□□□□ -1.87
LSM3P62310 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM3P62310 AC106785.3-201ENST00000564064 847 ntBASIC3.35□□□□□ -1.87
LSM3P62310 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM3P62310 MIR3176-201ENST00000582210 90 ntBASIC3.35□□□□□ -1.87
LSM3P62310 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM3P62310 SNX6P1-201ENST00000601728 1224 ntBASIC3.35□□□□□ -1.87
LSM3P62310 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM3P62310 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM3P62310 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM3P62310 MIR7153-201ENST00000637758 57 ntBASIC3.35□□□□□ -1.87
LSM3P62310 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM3P62310 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM3P62310 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM3P62310 RLIMP2-201ENST00000427891 1563 ntBASIC3.34□□□□□ -1.87
LSM3P62310 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LSM3P62310 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM3P62310 OR4K15-201ENST00000305051 1216 ntBASIC3.34□□□□□ -1.87
LSM3P62310 RNA5SP443-201ENST00000363083 132 ntBASIC3.34□□□□□ -1.87
LSM3P62310 RNU1-132P-201ENST00000364300 164 ntBASIC3.34□□□□□ -1.87
LSM3P62310 RNU11-4P-201ENST00000391149 133 ntBASIC3.34□□□□□ -1.87
LSM3P62310 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM3P62310 RNU6-55P-201ENST00000411092 107 ntBASIC3.34□□□□□ -1.87
LSM3P62310 RNU6-954P-201ENST00000411355 107 ntBASIC3.34□□□□□ -1.87
LSM3P62310 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM3P62310 RPL17P36-201ENST00000420302 549 ntBASIC3.34□□□□□ -1.87
LSM3P62310 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM3P62310 AC074367.1-201ENST00000438685 1125 ntBASIC3.34□□□□□ -1.87
LSM3P62310 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM3P62310 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM3P62310 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
LSM3P62310 AC010401.1-201ENST00000463867 348 ntBASIC3.34□□□□□ -1.87
LSM3P62310 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
LSM3P62310 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM3P62310 snoU109.6-201ENST00000516831 118 ntBASIC3.34□□□□□ -1.87
LSM3P62310 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.34□□□□□ -1.87
LSM3P62310 DUX4L52-201ENST00000549363 777 ntBASIC3.34□□□□□ -1.87
LSM3P62310 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.34□□□□□ -1.87
LSM3P62310 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.34□□□□□ -1.87
LSM3P62310 AC011445.2-201ENST00000599274 173 ntBASIC3.34□□□□□ -1.87
LSM3P62310 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM3P62310 AC090948.2-201ENST00000607363 564 ntBASIC3.34□□□□□ -1.87
LSM3P62310 AL035461.2-201ENST00000619201 524 ntBASIC3.34□□□□□ -1.87
LSM3P62310 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.34□□□□□ -1.87
LSM3P62310 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
LSM3P62310 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LSM3P62310 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LSM3P62310 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM3P62310 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM3P62310 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LSM3P62310 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LSM3P62310 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
LSM3P62310 AC004972.1-201ENST00000623934 2209 ntBASIC3.34□□□□□ -1.88
LSM3P62310 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
LSM3P62310 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM3P62310 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM3P62310 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 AL035696.2-201ENST00000407941 709 ntBASIC3.33□□□□□ -1.88
LSM3P62310 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM3P62310 HMGB3P20-201ENST00000417997 600 ntBASIC3.33□□□□□ -1.88
LSM3P62310 HMGB3P5-201ENST00000428894 612 ntBASIC3.33□□□□□ -1.88
LSM3P62310 NPM1P48-201ENST00000436002 853 ntBASIC3.33□□□□□ -1.88
LSM3P62310 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM3P62310 AL132838.2-201ENST00000492041 314 ntBASIC3.33□□□□□ -1.88
LSM3P62310 AC092045.1-201ENST00000495716 1231 ntBASIC3.33□□□□□ -1.88
LSM3P62310 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.33□□□□□ -1.88
LSM3P62310 AC021146.5-201ENST00000503544 545 ntBASIC3.33□□□□□ -1.88
LSM3P62310 AC093763.2-201ENST00000505334 1223 ntBASIC3.33□□□□□ -1.88
LSM3P62310 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM3P62310 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
LSM3P62310 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.33□□□□□ -1.88
LSM3P62310 AC090819.1-201ENST00000523800 1111 ntBASIC3.33□□□□□ -1.88
LSM3P62310 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM3P62310 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM3P62310 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LSM3P62310 AC091516.1-201ENST00000549191 703 ntBASIC3.33□□□□□ -1.88
LSM3P62310 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.33□□□□□ -1.88
LSM3P62310 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.33□□□□□ -1.88
LSM3P62310 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms