Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC069366.1-201ENST00000583159 838 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 AC068790.5-201ENST00000602741 355 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 MIR432-201ENST00000606207 94 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 AC084036.1-201ENST00000609190 508 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 AC239803.2-201ENST00000610161 430 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 AC023043.4-201ENST00000612081 449 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHMT2P34897 RMST_9.1-201ENST00000619945 193 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 AC008013.2-202ENST00000637965 364 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.11□□□□□ -1.75
SHMT2P34897 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.11□□□□□ -1.75
SHMT2P34897 LARP1BP1-201ENST00000506036 1359 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SHMT2P34897 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHMT2P34897 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHMT2P34897 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.11□□□□□ -1.75
SHMT2P34897 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
SHMT2P34897 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHMT2P34897 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHMT2P34897 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHMT2P34897 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHMT2P34897 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
SHMT2P34897 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SHMT2P34897 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHMT2P34897 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.1□□□□□ -1.75
SHMT2P34897 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.1□□□□□ -1.75
SHMT2P34897 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.1□□□□□ -1.75
SHMT2P34897 MTND2P11-201ENST00000423638 648 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 AL445528.1-201ENST00000426330 420 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 COX6B1P7-201ENST00000430845 235 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.1□□□□□ -1.75
SHMT2P34897 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHMT2P34897 EEF1A1P1-201ENST00000447052 739 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.1□□□□□ -1.75
SHMT2P34897 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.1□□□□□ -1.75
SHMT2P34897 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.1□□□□□ -1.75
SHMT2P34897 FABP5P6-201ENST00000510588 409 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 VWA8P1-201ENST00000510889 176 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHMT2P34897 AC099522.1-202ENST00000514718 367 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 SNORA31.9-201ENST00000516429 84 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 snoU109.6-201ENST00000516831 118 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 AC105233.3-201ENST00000531125 744 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 UBTFL9-201ENST00000534504 1148 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SHMT2P34897 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.1□□□□□ -1.75
SHMT2P34897 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.1□□□□□ -1.75
SHMT2P34897 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.1□□□□□ -1.75
SHMT2P34897 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.1□□□□□ -1.75
SHMT2P34897 MIR4697-201ENST00000582977 78 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.1□□□□□ -1.75
SHMT2P34897 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.1□□□□□ -1.75
SHMT2P34897 AC233309.1-201ENST00000619522 751 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 AC104820.1-201ENST00000624183 307 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.1□□□□□ -1.75
SHMT2P34897 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.1□□□□□ -1.75
SHMT2P34897 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHMT2P34897 PNPT1P2-201ENST00000456768 2050 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SHMT2P34897 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.1□□□□□ -1.75
SHMT2P34897 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.1□□□□□ -1.75
SHMT2P34897 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SHMT2P34897 AC097504.1-201ENST00000515103 2415 ntBASIC4.1□□□□□ -1.75
SHMT2P34897 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHMT2P34897 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHMT2P34897 AL356489.2-201ENST00000566968 3528 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHMT2P34897 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 AC018555.1-201ENST00000567548 1980 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SHMT2P34897 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHMT2P34897 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHMT2P34897 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHMT2P34897 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHMT2P34897 RNA5SP388-201ENST00000362584 119 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 GCNT6-201ENST00000379591 934 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 SNORA70C-201ENST00000384538 135 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 RPS26P8-201ENST00000393490 348 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHMT2P34897 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 RNF19BPX-201ENST00000426224 625 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 YWHAEP5-201ENST00000431545 765 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.09□□□□□ -1.75
SHMT2P34897 AL606490.7-201ENST00000433136 191 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 MRPS33P4-201ENST00000434892 317 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.09□□□□□ -1.75
SHMT2P34897 HMGB3P22-202ENST00000451823 572 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 RPL5P13-201ENST00000462840 709 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 RPS27AP13-201ENST00000498403 237 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.09□□□□□ -1.75
SHMT2P34897 BNIP3P41-201ENST00000503774 571 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.09□□□□□ -1.75
SHMT2P34897 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.09□□□□□ -1.75
SHMT2P34897 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.09□□□□□ -1.75
SHMT2P34897 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.09□□□□□ -1.75
SHMT2P34897 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.09□□□□□ -1.75
SHMT2P34897 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms