Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL358176.3-201ENST00000420757 454 ntBASIC5□□□□□ -1.61
MMP3P08254 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5□□□□□ -1.61
MMP3P08254 OSTCP5-201ENST00000425293 453 ntBASIC5□□□□□ -1.61
MMP3P08254 RPL21P43-201ENST00000425440 472 ntBASIC5□□□□□ -1.61
MMP3P08254 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5□□□□□ -1.61
MMP3P08254 ELOCP11-201ENST00000436690 332 ntBASIC5□□□□□ -1.61
MMP3P08254 AC122718.1-201ENST00000439448 744 ntBASIC5□□□□□ -1.61
MMP3P08254 ELOCP16-201ENST00000444494 332 ntBASIC5□□□□□ -1.61
MMP3P08254 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5□□□□□ -1.61
MMP3P08254 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5□□□□□ -1.61
MMP3P08254 FAM133DP-201ENST00000464802 691 ntBASIC5□□□□□ -1.61
MMP3P08254 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5□□□□□ -1.61
MMP3P08254 MTCO3P35-201ENST00000485582 781 ntBASIC5□□□□□ -1.61
MMP3P08254 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5□□□□□ -1.61
MMP3P08254 RN7SKP287-201ENST00000516546 266 ntBASIC5□□□□□ -1.61
MMP3P08254 RNA5SP230-201ENST00000517039 122 ntBASIC5□□□□□ -1.61
MMP3P08254 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5□□□□□ -1.61
MMP3P08254 AP003730.1-201ENST00000524605 285 ntBASIC5□□□□□ -1.61
MMP3P08254 OR10V3P-201ENST00000525712 725 ntBASIC5□□□□□ -1.61
MMP3P08254 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5□□□□□ -1.61
MMP3P08254 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5□□□□□ -1.61
MMP3P08254 TRAV8-5-201ENST00000537369 341 ntBASIC5□□□□□ -1.61
MMP3P08254 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5□□□□□ -1.61
MMP3P08254 AL390334.1-201ENST00000556395 450 ntBASIC5□□□□□ -1.61
MMP3P08254 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5□□□□□ -1.61
MMP3P08254 AC015912.2-201ENST00000571053 181 ntBASIC5□□□□□ -1.61
MMP3P08254 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5□□□□□ -1.61
MMP3P08254 AC073387.2-201ENST00000604797 784 ntBASIC5□□□□□ -1.61
MMP3P08254 AC113403.1-201ENST00000604910 193 ntBASIC5□□□□□ -1.61
MMP3P08254 AC093424.1-201ENST00000604999 338 ntBASIC5□□□□□ -1.61
MMP3P08254 ZYXP1-201ENST00000617638 118 ntBASIC5□□□□□ -1.61
MMP3P08254 AC015914.2-201ENST00000618167 288 ntBASIC5□□□□□ -1.61
MMP3P08254 AC048344.4-201ENST00000619744 527 ntBASIC5□□□□□ -1.61
MMP3P08254 AL161637.1-201ENST00000622380 412 ntBASIC5□□□□□ -1.61
MMP3P08254 AC138965.3-201ENST00000623875 498 ntBASIC5□□□□□ -1.61
MMP3P08254 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5□□□□□ -1.61
MMP3P08254 EIF2AP4-201ENST00000424793 1781 ntBASIC5□□□□□ -1.61
MMP3P08254 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5□□□□□ -1.61
MMP3P08254 AL031595.2-201ENST00000624215 19071 ntBASIC5□□□□□ -1.61
MMP3P08254 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5□□□□□ -1.61
MMP3P08254 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5□□□□□ -1.61
MMP3P08254 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
MMP3P08254 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5□□□□□ -1.61
MMP3P08254 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 AL355852.1-201ENST00000454081 1771 ntBASIC4.99□□□□□ -1.61
MMP3P08254 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 RNU1-132P-201ENST00000364300 164 ntBASIC4.99□□□□□ -1.61
MMP3P08254 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MMP3P08254 MCTS2P-201ENST00000394552 546 ntBASIC4.99□□□□□ -1.61
MMP3P08254 UBE2V1P11-201ENST00000411559 285 ntBASIC4.99□□□□□ -1.61
MMP3P08254 LINC01347-201ENST00000417964 355 ntBASIC4.99□□□□□ -1.61
MMP3P08254 MTCO3P4-201ENST00000419236 787 ntBASIC4.99□□□□□ -1.61
MMP3P08254 AL139095.3-201ENST00000419672 1203 ntBASIC4.99□□□□□ -1.61
MMP3P08254 FO393419.3-201ENST00000428741 282 ntBASIC4.99□□□□□ -1.61
MMP3P08254 MTND2P5-201ENST00000432656 1006 ntBASIC4.99□□□□□ -1.61
MMP3P08254 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.99□□□□□ -1.61
MMP3P08254 OR10R1P-201ENST00000441524 1141 ntBASIC4.99□□□□□ -1.61
MMP3P08254 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.99□□□□□ -1.61
MMP3P08254 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.99□□□□□ -1.61
MMP3P08254 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.99□□□□□ -1.61
MMP3P08254 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.99□□□□□ -1.61
MMP3P08254 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.99□□□□□ -1.61
MMP3P08254 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.99□□□□□ -1.61
MMP3P08254 OR8K4P-201ENST00000534608 872 ntBASIC4.99□□□□□ -1.61
MMP3P08254 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 AL358913.1-201ENST00000554342 121 ntBASIC4.99□□□□□ -1.61
MMP3P08254 AC009852.2-201ENST00000567898 485 ntBASIC4.99□□□□□ -1.61
MMP3P08254 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 AC106052.1-201ENST00000608029 497 ntBASIC4.99□□□□□ -1.61
MMP3P08254 AL356274.1-201ENST00000617064 410 ntBASIC4.99□□□□□ -1.61
MMP3P08254 MIR6891-201ENST00000618788 93 ntBASIC4.99□□□□□ -1.61
MMP3P08254 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 AP003497.2-201ENST00000624220 967 ntBASIC4.99□□□□□ -1.61
MMP3P08254 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MMP3P08254 AC017007.4-201ENST00000503353 1352 ntBASIC4.99□□□□□ -1.61
MMP3P08254 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MMP3P08254 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MMP3P08254 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
MMP3P08254 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
MMP3P08254 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
MMP3P08254 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MMP3P08254 AL022322.2-201ENST00000624072 20397 ntBASIC4.98□□□□□ -1.61
MMP3P08254 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
MMP3P08254 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MMP3P08254 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MMP3P08254 MIR331-201ENST00000362302 94 ntBASIC4.98□□□□□ -1.61
MMP3P08254 RPS26P8-201ENST00000393490 348 ntBASIC4.98□□□□□ -1.61
MMP3P08254 AC233289.1-201ENST00000403700 508 ntBASIC4.98□□□□□ -1.61
MMP3P08254 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 AC092638.1-201ENST00000411966 1275 ntBASIC4.98□□□□□ -1.61
MMP3P08254 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.98□□□□□ -1.61
MMP3P08254 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.98□□□□□ -1.61
MMP3P08254 CDC27P1-201ENST00000445384 715 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms