Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AL078621.3-201ENST00000623707 2042 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 RNU4-75P-201ENST00000364621 146 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 MIR217-201ENST00000384817 110 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 NPM1P11-201ENST00000417106 855 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 IFNNP1-201ENST00000429219 553 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 RPL7AP49-201ENST00000429522 581 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AL591438.1-201ENST00000433508 581 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 SEPT7P5-201ENST00000434048 306 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 MTND1P27-201ENST00000451117 902 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 BRD9P1-201ENST00000529855 560 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC126177.5-201ENST00000549599 178 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC137768.1-201ENST00000549998 553 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 PCNPP1-201ENST00000552501 511 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC011260.1-201ENST00000578420 472 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 BPTFP1-201ENST00000579209 492 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC004987.4-201ENST00000603383 338 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC000068.2-201ENST00000608816 460 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC245297.2-201ENST00000610119 565 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC109583.2-201ENST00000617367 129 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AL607023.1-201ENST00000620045 248 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AP003400.3-201ENST00000624904 346 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC099654.6-201ENST00000636487 512 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 DCAF13P3-201ENST00000561147 1334 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC109315.1-201ENST00000584143 1347 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 ZNF833P-201ENST00000424938 1494 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
USP18Q9UMW8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 NLRP3P1-201ENST00000622303 1785 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC068870.3-201ENST00000625077 2536 ntBASIC5.62□□□□□ -1.51
USP18Q9UMW8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP18Q9UMW8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP18Q9UMW8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP18Q9UMW8 Y_RNA.408-201ENST00000383987 102 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 AL445213.1-201ENST00000412589 747 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 OR51A3P-201ENST00000413596 924 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 AL161449.1-201ENST00000414531 1199 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 MTCO3P41-201ENST00000414801 328 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 RPL21P110-201ENST00000433345 446 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 AC093155.1-201ENST00000440164 826 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 AC090804.1-201ENST00000448870 490 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 OR52J1P-201ENST00000450596 932 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 RPL12P26-201ENST00000452430 487 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 NDUFA12P1-201ENST00000455914 406 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 RPS29P33-201ENST00000456717 146 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.61□□□□□ -1.51
USP18Q9UMW8 AC104689.1-201ENST00000473356 768 ntBASIC5.61□□□□□ -1.51
USP18Q9UMW8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms