Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC090888.3-201ENST00000558917 509 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 MTATP6P2-201ENST00000603319 678 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AP003392.5-201ENST00000607857 415 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AC010872.1-201ENST00000624225 675 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 AP000756.2-201ENST00000624168 2567 ntBASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC28BQ9BUN5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 CYP1D1P-201ENST00000416662 1433 ntBASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC28BQ9BUN5 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AL590240.1-201ENST00000334118 313 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 SNORA63.3-201ENST00000362682 132 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 RN7SKP44-201ENST00000363602 316 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 MIR659-201ENST00000384963 97 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 MIR1183-201ENST00000408856 89 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 RPL26P37-201ENST00000411983 438 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 ARL2BPP3-201ENST00000421226 480 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC013410.2-201ENST00000422627 201 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC069499.1-201ENST00000489433 509 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC006499.3-201ENST00000506077 748 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 IGLVIV-64-201ENST00000518581 301 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 MTND5P21-201ENST00000531961 522 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 CBX3P5-201ENST00000552017 521 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC021483.2-201ENST00000567415 758 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 FAM106CP-201ENST00000582212 507 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC006116.7-201ENST00000590141 756 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AL034351.1-201ENST00000605288 668 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC018645.2-201ENST00000609151 472 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 AC244205.2-202ENST00000635781 342 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 OR8A1-204ENST00000642111 1145 ntBASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC28BQ9BUN5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 SDAD1P1-202ENST00000524156 2051 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC009951.1-201ENST00000623674 2614 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 RN7SKP149-201ENST00000363008 344 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 MIR3065-201ENST00000390137 79 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 SNORA3C-201ENST00000408792 125 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 RN7SKP213-201ENST00000410746 298 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AL132765.1-201ENST00000434165 553 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 GXYLT1P1-201ENST00000446657 490 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 RPSAP50-201ENST00000481955 852 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC092045.1-201ENST00000495716 1231 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 NIPA2P2-201ENST00000496376 1083 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC104164.2-201ENST00000496953 495 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC008953.1-201ENST00000497334 318 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 ATP1B1P1-201ENST00000509767 915 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 RNA5SP143-201ENST00000516936 115 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 IGKV2D-23-201ENST00000518179 286 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 NARSP2-201ENST00000518524 679 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 IGHV3-32-201ENST00000519182 355 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AP000827.1-201ENST00000527814 258 ntBASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC28BQ9BUN5 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms