Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP47Q96K76 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP47Q96K76 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
USP47Q96K76 RNA5SP124-201ENST00000362739 110 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 RPS3AP25-201ENST00000411660 793 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.48□□□□□ -1.53
USP47Q96K76 REREP1Y-201ENST00000422655 198 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 REREP2Y-201ENST00000439103 200 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
USP47Q96K76 OR9M1P-201ENST00000459641 921 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 IGHV3-63-201ENST00000518422 341 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 TRMT10BP1-201ENST00000519377 943 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.48□□□□□ -1.53
USP47Q96K76 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.48□□□□□ -1.53
USP47Q96K76 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
USP47Q96K76 AC023389.2-201ENST00000580031 955 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 AC010809.3-201ENST00000621310 641 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.48□□□□□ -1.53
USP47Q96K76 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
USP47Q96K76 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
USP47Q96K76 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.48□□□□□ -1.53
USP47Q96K76 BTBD10P1-201ENST00000549824 1352 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 AC005261.6-201ENST00000623072 1387 ntBASIC5.48□□□□□ -1.53
USP47Q96K76 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP47Q96K76 UBE3AP2-201ENST00000429033 2259 ntBASIC5.47□□□□□ -1.53
USP47Q96K76 RNU6-673P-201ENST00000365084 104 ntBASIC5.47□□□□□ -1.53
USP47Q96K76 AC009237.5-201ENST00000414271 501 ntBASIC5.47□□□□□ -1.53
USP47Q96K76 AC017078.1-201ENST00000416146 368 ntBASIC5.47□□□□□ -1.53
USP47Q96K76 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.47□□□□□ -1.53
USP47Q96K76 GAPDHP36-201ENST00000480688 918 ntBASIC5.47□□□□□ -1.53
USP47Q96K76 AC007991.1-201ENST00000522680 631 ntBASIC5.47□□□□□ -1.53
USP47Q96K76 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USP47Q96K76 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.47□□□□□ -1.53
USP47Q96K76 AL161756.2-201ENST00000604597 246 ntBASIC5.47□□□□□ -1.53
USP47Q96K76 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.47□□□□□ -1.53
USP47Q96K76 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
USP47Q96K76 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.47□□□□□ -1.53
USP47Q96K76 AP001284.1-201ENST00000528393 2118 ntBASIC5.47□□□□□ -1.53
USP47Q96K76 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.47□□□□□ -1.53
USP47Q96K76 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP47Q96K76 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP47Q96K76 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
USP47Q96K76 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
USP47Q96K76 AC005261.2-201ENST00000593427 4258 ntBASIC5.46□□□□□ -1.54
USP47Q96K76 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
USP47Q96K76 RNU6-525P-201ENST00000363685 104 ntBASIC5.46□□□□□ -1.54
USP47Q96K76 AL590704.1-201ENST00000402856 794 ntBASIC5.46□□□□□ -1.54
USP47Q96K76 DPPA2P2-201ENST00000418220 897 ntBASIC5.46□□□□□ -1.54
USP47Q96K76 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.46□□□□□ -1.54
USP47Q96K76 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.46□□□□□ -1.54
USP47Q96K76 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.46□□□□□ -1.54
USP47Q96K76 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.46□□□□□ -1.54
USP47Q96K76 RPL5P16-201ENST00000471467 790 ntBASIC5.46□□□□□ -1.54
USP47Q96K76 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.46□□□□□ -1.54
USP47Q96K76 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.46□□□□□ -1.54
USP47Q96K76 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.46□□□□□ -1.54
USP47Q96K76 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.46□□□□□ -1.54
USP47Q96K76 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.46□□□□□ -1.54
USP47Q96K76 AC015813.4-201ENST00000610469 179 ntBASIC5.46□□□□□ -1.54
USP47Q96K76 AL591424.2-201ENST00000617023 128 ntBASIC5.46□□□□□ -1.54
USP47Q96K76 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.46□□□□□ -1.54
USP47Q96K76 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP47Q96K76 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP47Q96K76 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.46□□□□□ -1.54
USP47Q96K76 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP47Q96K76 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP47Q96K76 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.46□□□□□ -1.54
USP47Q96K76 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
USP47Q96K76 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.46□□□□□ -1.54
USP47Q96K76 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
USP47Q96K76 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
USP47Q96K76 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
USP47Q96K76 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP47Q96K76 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.45□□□□□ -1.54
USP47Q96K76 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP47Q96K76 OR51A6P-201ENST00000418680 1004 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.45□□□□□ -1.54
USP47Q96K76 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.45□□□□□ -1.54
USP47Q96K76 AL353748.1-201ENST00000440753 474 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 CYCSP53-201ENST00000455540 265 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.45□□□□□ -1.54
USP47Q96K76 AC026726.1-201ENST00000512859 601 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 RN7SKP157-201ENST00000516174 282 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.45□□□□□ -1.54
USP47Q96K76 AC017100.2-201ENST00000584628 355 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 SNORA51-201ENST00000606420 132 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 AC079684.1-201ENST00000621405 437 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 AL354798.1-201ENST00000622505 329 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
USP47Q96K76 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.45□□□□□ -1.54
USP47Q96K76 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USP47Q96K76 DDX18P6-201ENST00000450119 1997 ntBASIC5.45□□□□□ -1.54
USP47Q96K76 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.45□□□□□ -1.54
USP47Q96K76 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP47Q96K76 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
USP47Q96K76 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
USP47Q96K76 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP47Q96K76 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP47Q96K76 MIR7-3-201ENST00000384898 110 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms