Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 IPO5P1-202ENST00000600039 287 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AC011374.2-201ENST00000607135 526 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AC112503.2-201ENST00000609005 552 ntBASIC4.65□□□□□ -1.67
LHX1P48742 MIR6716-201ENST00000613413 80 ntBASIC4.65□□□□□ -1.67
LHX1P48742 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AC018926.1-201ENST00000616335 435 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AC140113.4-201ENST00000622087 222 ntBASIC4.65□□□□□ -1.67
LHX1P48742 AP000843.1-201ENST00000624880 701 ntBASIC4.65□□□□□ -1.67
LHX1P48742 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LHX1P48742 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.65□□□□□ -1.67
LHX1P48742 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LHX1P48742 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LHX1P48742 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LHX1P48742 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
LHX1P48742 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
LHX1P48742 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LHX1P48742 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.65□□□□□ -1.67
LHX1P48742 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.65□□□□□ -1.67
LHX1P48742 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.65□□□□□ -1.67
LHX1P48742 GTF2H2B-203ENST00000508065 1432 ntBASIC4.64□□□□□ -1.67
LHX1P48742 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LHX1P48742 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LHX1P48742 AC027290.2-201ENST00000623210 18662 ntBASIC4.64□□□□□ -1.67
LHX1P48742 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LHX1P48742 FAM3C2-201ENST00000312214 681 ntBASIC4.64□□□□□ -1.67
LHX1P48742 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LHX1P48742 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LHX1P48742 CEACAMP8-201ENST00000413902 580 ntBASIC4.64□□□□□ -1.67
LHX1P48742 BX664727.1-201ENST00000416024 466 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.64□□□□□ -1.67
LHX1P48742 EIF1P3-201ENST00000423841 334 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AC234779.1-201ENST00000425910 285 ntBASIC4.64□□□□□ -1.67
LHX1P48742 MTCO1P43-201ENST00000431831 488 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.64□□□□□ -1.67
LHX1P48742 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.64□□□□□ -1.67
LHX1P48742 RPL23AP52-201ENST00000439311 478 ntBASIC4.64□□□□□ -1.67
LHX1P48742 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.64□□□□□ -1.67
LHX1P48742 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LHX1P48742 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.64□□□□□ -1.67
LHX1P48742 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LHX1P48742 RNA5SP103-201ENST00000459503 118 ntBASIC4.64□□□□□ -1.67
LHX1P48742 RPL35AP15-201ENST00000468042 339 ntBASIC4.64□□□□□ -1.67
LHX1P48742 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LHX1P48742 AC010618.1-201ENST00000469924 477 ntBASIC4.64□□□□□ -1.67
LHX1P48742 CYCSP20-201ENST00000473154 315 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AC091167.1-201ENST00000492017 396 ntBASIC4.64□□□□□ -1.67
LHX1P48742 OR5H3P-201ENST00000502817 919 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AC010374.1-201ENST00000503762 1237 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.64□□□□□ -1.67
LHX1P48742 PARP4P3-201ENST00000510265 317 ntBASIC4.64□□□□□ -1.67
LHX1P48742 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.64□□□□□ -1.67
LHX1P48742 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.64□□□□□ -1.67
LHX1P48742 AC090151.1-201ENST00000520784 730 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.64□□□□□ -1.67
LHX1P48742 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
LHX1P48742 AC138701.1-201ENST00000524329 714 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.64□□□□□ -1.67
LHX1P48742 PARP1P2-201ENST00000556806 195 ntBASIC4.64□□□□□ -1.67
LHX1P48742 ATP5J2P6-201ENST00000565203 266 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.64□□□□□ -1.67
LHX1P48742 AC106734.1-201ENST00000568646 663 ntBASIC4.64□□□□□ -1.67
LHX1P48742 RPL23AP97-201ENST00000568955 471 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AC136624.4-201ENST00000573044 370 ntBASIC4.64□□□□□ -1.67
LHX1P48742 KPNA2P3-201ENST00000584190 848 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AL160290.3-201ENST00000604869 165 ntBASIC4.64□□□□□ -1.67
LHX1P48742 Z98200.1-201ENST00000607298 470 ntBASIC4.64□□□□□ -1.67
LHX1P48742 SNORD91B-202ENST00000608459 222 ntBASIC4.64□□□□□ -1.67
LHX1P48742 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.64□□□□□ -1.67
LHX1P48742 AC245100.7-201ENST00000609678 442 ntBASIC4.64□□□□□ -1.67
LHX1P48742 RMST_10.1-201ENST00000616309 154 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AL121890.2-201ENST00000617644 465 ntBASIC4.64□□□□□ -1.67
LHX1P48742 AC083865.1-201ENST00000636634 831 ntBASIC4.64□□□□□ -1.67
LHX1P48742 FP325313.1-201ENST00000638228 703 ntBASIC4.64□□□□□ -1.67
LHX1P48742 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.64□□□□□ -1.67
LHX1P48742 CASC19-204ENST00000641001 2055 ntBASIC4.64□□□□□ -1.67
LHX1P48742 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LHX1P48742 AC009951.1-201ENST00000623674 2614 ntBASIC4.64□□□□□ -1.67
LHX1P48742 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.64□□□□□ -1.67
LHX1P48742 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LHX1P48742 AL672167.1-203ENST00000641299 2975 ntBASIC4.64□□□□□ -1.67
LHX1P48742 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
LHX1P48742 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX1P48742 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
LHX1P48742 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.63□□□□□ -1.67
LHX1P48742 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX1P48742 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX1P48742 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LHX1P48742 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LHX1P48742 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LHX1P48742 RNU1-132P-201ENST00000364300 164 ntBASIC4.63□□□□□ -1.67
LHX1P48742 AL049693.1-201ENST00000402760 611 ntBASIC4.63□□□□□ -1.67
LHX1P48742 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LHX1P48742 RPL23AP26-201ENST00000412728 464 ntBASIC4.63□□□□□ -1.67
LHX1P48742 AC023128.2-201ENST00000420880 1223 ntBASIC4.63□□□□□ -1.67
LHX1P48742 AL353093.1-201ENST00000441292 436 ntBASIC4.63□□□□□ -1.67
LHX1P48742 AC009963.2-201ENST00000453431 138 ntBASIC4.63□□□□□ -1.67
LHX1P48742 AL354710.1-201ENST00000453641 246 ntBASIC4.63□□□□□ -1.67
LHX1P48742 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.63□□□□□ -1.67
LHX1P48742 RPL21P6-201ENST00000479171 504 ntBASIC4.63□□□□□ -1.67
LHX1P48742 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms