Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 CDC27P1-201ENST00000445384 715 ntBASIC3.73□□□□□ -1.81
USF1P22415 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.73□□□□□ -1.81
USF1P22415 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.73□□□□□ -1.81
USF1P22415 AC005229.2-201ENST00000456995 399 ntBASIC3.73□□□□□ -1.81
USF1P22415 RNU7-27P-201ENST00000459281 62 ntBASIC3.73□□□□□ -1.81
USF1P22415 RPS20P4-201ENST00000461659 355 ntBASIC3.73□□□□□ -1.81
USF1P22415 RPS7P7-201ENST00000463499 571 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.73□□□□□ -1.81
USF1P22415 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.73□□□□□ -1.81
USF1P22415 MTND3P6-201ENST00000485242 339 ntBASIC3.73□□□□□ -1.81
USF1P22415 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC021087.2-201ENST00000504656 1203 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.73□□□□□ -1.81
USF1P22415 AC104997.1-201ENST00000519761 717 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.73□□□□□ -1.81
USF1P22415 SMARCE1P4-201ENST00000523647 241 ntBASIC3.73□□□□□ -1.81
USF1P22415 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.73□□□□□ -1.81
USF1P22415 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 AC025884.1-201ENST00000556034 378 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC022884.3-201ENST00000579571 248 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC022387.2-201ENST00000604050 448 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC113403.1-201ENST00000604910 193 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.73□□□□□ -1.81
USF1P22415 AC020634.1-201ENST00000608701 549 ntBASIC3.73□□□□□ -1.81
USF1P22415 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.73□□□□□ -1.81
USF1P22415 AC016957.2-201ENST00000616998 848 ntBASIC3.73□□□□□ -1.81
USF1P22415 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.73□□□□□ -1.81
USF1P22415 uc_338.13-201ENST00000618243 179 ntBASIC3.73□□□□□ -1.81
USF1P22415 MIR6715B-201ENST00000637172 77 ntBASIC3.73□□□□□ -1.81
USF1P22415 AL139254.3-201ENST00000641097 674 ntBASIC3.73□□□□□ -1.81
USF1P22415 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.73□□□□□ -1.81
USF1P22415 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.73□□□□□ -1.81
USF1P22415 EIF2AP4-201ENST00000424793 1781 ntBASIC3.73□□□□□ -1.81
USF1P22415 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
USF1P22415 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
USF1P22415 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.73□□□□□ -1.81
USF1P22415 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USF1P22415 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.72□□□□□ -1.81
USF1P22415 AC017104.4-201ENST00000636283 1592 ntBASIC3.72□□□□□ -1.81
USF1P22415 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF1P22415 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF1P22415 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USF1P22415 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
USF1P22415 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USF1P22415 MIR448-201ENST00000362131 111 ntBASIC3.72□□□□□ -1.81
USF1P22415 MIR383-201ENST00000362257 73 ntBASIC3.72□□□□□ -1.81
USF1P22415 RNU1-85P-201ENST00000364127 164 ntBASIC3.72□□□□□ -1.81
USF1P22415 FCF1P5-201ENST00000406490 482 ntBASIC3.72□□□□□ -1.81
USF1P22415 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.72□□□□□ -1.81
USF1P22415 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.72□□□□□ -1.81
USF1P22415 SNRPFP1-201ENST00000414761 252 ntBASIC3.72□□□□□ -1.81
USF1P22415 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.72□□□□□ -1.81
USF1P22415 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.72□□□□□ -1.81
USF1P22415 EIF4EP1-201ENST00000422311 642 ntBASIC3.72□□□□□ -1.81
USF1P22415 RPL21P91-201ENST00000429231 479 ntBASIC3.72□□□□□ -1.81
USF1P22415 NDUFA5P10-201ENST00000432147 357 ntBASIC3.72□□□□□ -1.81
USF1P22415 TPTE2P1-204ENST00000435256 593 ntBASIC3.72□□□□□ -1.81
USF1P22415 AC122718.1-201ENST00000439448 744 ntBASIC3.72□□□□□ -1.81
USF1P22415 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.72□□□□□ -1.81
USF1P22415 RPL23AP43-201ENST00000446445 471 ntBASIC3.72□□□□□ -1.81
USF1P22415 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.72□□□□□ -1.81
USF1P22415 AC012671.1-201ENST00000451912 203 ntBASIC3.72□□□□□ -1.81
USF1P22415 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 FAM133DP-201ENST00000464802 691 ntBASIC3.72□□□□□ -1.81
USF1P22415 AC012158.1-204ENST00000483430 465 ntBASIC3.72□□□□□ -1.81
USF1P22415 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.72□□□□□ -1.81
USF1P22415 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USF1P22415 SLC25A15P5-201ENST00000508033 253 ntBASIC3.72□□□□□ -1.81
USF1P22415 AC108120.2-201ENST00000512973 294 ntBASIC3.72□□□□□ -1.81
USF1P22415 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
USF1P22415 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 RNA5SP497-201ENST00000516081 97 ntBASIC3.72□□□□□ -1.81
USF1P22415 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.72□□□□□ -1.81
USF1P22415 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 AC008083.2-201ENST00000546707 476 ntBASIC3.72□□□□□ -1.81
USF1P22415 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 NPM1P47-201ENST00000560843 856 ntBASIC3.72□□□□□ -1.81
USF1P22415 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.72□□□□□ -1.81
USF1P22415 RPL7P50-201ENST00000600588 727 ntBASIC3.72□□□□□ -1.81
USF1P22415 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 AC135803.1-201ENST00000608748 565 ntBASIC3.72□□□□□ -1.81
USF1P22415 AL161637.1-201ENST00000622380 412 ntBASIC3.72□□□□□ -1.81
USF1P22415 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 CPHL1P-201ENST00000461341 3407 ntBASIC3.72□□□□□ -1.81
USF1P22415 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
USF1P22415 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
USF1P22415 LINC00622-201ENST00000562811 1570 ntBASIC3.72□□□□□ -1.81
USF1P22415 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.71□□□□□ -1.81
USF1P22415 AL359715.4-201ENST00000606629 1436 ntBASIC3.71□□□□□ -1.82
USF1P22415 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
USF1P22415 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
USF1P22415 Z73965.1-201ENST00000623412 2297 ntBASIC3.71□□□□□ -1.82
USF1P22415 RNU1-130P-201ENST00000363930 160 ntBASIC3.71□□□□□ -1.82
USF1P22415 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
USF1P22415 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USF1P22415 SNORA37-201ENST00000384504 129 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms