Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL021707.7-201ENST00000607991 416 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC004825.2-201ENST00000616634 455 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AP006248.2-201ENST00000623309 592 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-DQA1P01909 AC131971.1-201ENST00000332881 1482 ntBASIC3.22□□□□□ -1.89
HLA-DQA1P01909 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.21□□□□□ -1.89
HLA-DQA1P01909 AC108467.2-201ENST00000617640 1597 ntBASIC3.21□□□□□ -1.89
HLA-DQA1P01909 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 MFSD8-242ENST00000641690 4199 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 SNORD51.1-201ENST00000365405 77 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AL353692.2-201ENST00000407054 335 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 RPS20P14-201ENST00000412545 360 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 MTND4P11-201ENST00000417020 1058 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 SEC63P1-201ENST00000425785 1258 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC006455.6-201ENST00000426192 893 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 IFNNP1-201ENST00000429219 553 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 ZNF965P-201ENST00000432501 817 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC009263.1-201ENST00000441193 1239 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AL500527.1-201ENST00000448532 255 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC108463.1-201ENST00000450258 347 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 MTCO3P20-201ENST00000454926 688 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC004453.1-201ENST00000487895 408 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 NIPA2P2-201ENST00000496376 1083 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 BTF3P13-201ENST00000513224 490 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC110775.1-201ENST00000513721 462 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC004923.2-201ENST00000529649 369 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC021006.3-201ENST00000530771 192 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC027176.2-201ENST00000559166 746 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 MIR4646-201ENST00000580775 63 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 MRPS35P3-201ENST00000603189 709 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 SUMO2P14-201ENST00000604488 293 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC064801.1-201ENST00000612025 407 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC010329.2-201ENST00000595195 2737 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DQA1P01909 LINC00561-201ENST00000565815 2738 ntBASIC3.21□□□□□ -1.9
HLA-DQA1P01909 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DQA1P01909 AC125257.1-201ENST00000560400 2930 ntBASIC3.2□□□□□ -1.9
HLA-DQA1P01909 AC090017.1-201ENST00000548612 1779 ntBASIC3.2□□□□□ -1.9
HLA-DQA1P01909 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQA1P01909 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.2□□□□□ -1.9
HLA-DQA1P01909 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQA1P01909 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DQA1P01909 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.2□□□□□ -1.9
HLA-DQA1P01909 SNORD115-48-201ENST00000364764 76 ntBASIC3.2□□□□□ -1.9
HLA-DQA1P01909 SNORA71.2-201ENST00000364941 134 ntBASIC3.2□□□□□ -1.9
HLA-DQA1P01909 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HLA-DQA1P01909 RNU6-452P-201ENST00000384406 107 ntBASIC3.2□□□□□ -1.9
HLA-DQA1P01909 AL645927.1-201ENST00000396783 406 ntBASIC3.2□□□□□ -1.9
HLA-DQA1P01909 AL356057.1-202ENST00000402263 756 ntBASIC3.2□□□□□ -1.9
HLA-DQA1P01909 Z98941.1-201ENST00000407764 100 ntBASIC3.2□□□□□ -1.9
HLA-DQA1P01909 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DQA1P01909 AC105402.1-201ENST00000413336 545 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms