Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MIR432-201ENST00000606207 94 ntBASIC4.18□□□□□ -1.74
LSM1O15116 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.18□□□□□ -1.74
LSM1O15116 AC135803.1-201ENST00000608748 565 ntBASIC4.18□□□□□ -1.74
LSM1O15116 AC243654.2-201ENST00000612843 443 ntBASIC4.18□□□□□ -1.74
LSM1O15116 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 AC007546.1-201ENST00000619452 559 ntBASIC4.18□□□□□ -1.74
LSM1O15116 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LSM1O15116 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.18□□□□□ -1.74
LSM1O15116 MTCO1P14-201ENST00000441695 1559 ntBASIC4.18□□□□□ -1.74
LSM1O15116 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LSM1O15116 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LSM1O15116 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LSM1O15116 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LSM1O15116 AL353746.1-201ENST00000566293 6881 ntBASIC4.17□□□□□ -1.74
LSM1O15116 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LSM1O15116 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LSM1O15116 MIR423-201ENST00000362201 94 ntBASIC4.17□□□□□ -1.74
LSM1O15116 RNU6-666P-201ENST00000363499 107 ntBASIC4.17□□□□□ -1.74
LSM1O15116 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LSM1O15116 RNU6-31P-201ENST00000384388 108 ntBASIC4.17□□□□□ -1.74
LSM1O15116 GSTA12P-201ENST00000402398 508 ntBASIC4.17□□□□□ -1.74
LSM1O15116 RPS27AP11-201ENST00000402798 447 ntBASIC4.17□□□□□ -1.74
LSM1O15116 AC013404.1-201ENST00000413068 249 ntBASIC4.17□□□□□ -1.74
LSM1O15116 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.17□□□□□ -1.74
LSM1O15116 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.17□□□□□ -1.74
LSM1O15116 UQCRBP1-201ENST00000421129 336 ntBASIC4.17□□□□□ -1.74
LSM1O15116 RBMY1KP-201ENST00000423480 476 ntBASIC4.17□□□□□ -1.74
LSM1O15116 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.17□□□□□ -1.74
LSM1O15116 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.17□□□□□ -1.74
LSM1O15116 AL360081.1-201ENST00000428299 555 ntBASIC4.17□□□□□ -1.74
LSM1O15116 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.17□□□□□ -1.74
LSM1O15116 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.17□□□□□ -1.74
LSM1O15116 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.17□□□□□ -1.74
LSM1O15116 RPL35AP15-201ENST00000468042 339 ntBASIC4.17□□□□□ -1.74
LSM1O15116 AC108145.1-201ENST00000503770 153 ntBASIC4.17□□□□□ -1.74
LSM1O15116 AC091917.2-201ENST00000505002 744 ntBASIC4.17□□□□□ -1.74
LSM1O15116 RNU6-491P-201ENST00000516099 110 ntBASIC4.17□□□□□ -1.74
LSM1O15116 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.17□□□□□ -1.74
LSM1O15116 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.17□□□□□ -1.74
LSM1O15116 OR5BC1P-201ENST00000529327 739 ntBASIC4.17□□□□□ -1.74
LSM1O15116 AC022884.3-201ENST00000579571 248 ntBASIC4.17□□□□□ -1.74
LSM1O15116 AC069061.3-201ENST00000582254 823 ntBASIC4.17□□□□□ -1.74
LSM1O15116 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.17□□□□□ -1.74
LSM1O15116 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.17□□□□□ -1.74
LSM1O15116 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.17□□□□□ -1.74
LSM1O15116 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.17□□□□□ -1.74
LSM1O15116 VN1R84P-201ENST00000593697 235 ntBASIC4.17□□□□□ -1.74
LSM1O15116 AC007423.1-201ENST00000605009 627 ntBASIC4.17□□□□□ -1.74
LSM1O15116 BNIP3P7-201ENST00000605641 516 ntBASIC4.17□□□□□ -1.74
LSM1O15116 AL713922.2-201ENST00000619384 716 ntBASIC4.17□□□□□ -1.74
LSM1O15116 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LSM1O15116 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.17□□□□□ -1.74
LSM1O15116 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
LSM1O15116 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
LSM1O15116 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.17□□□□□ -1.74
LSM1O15116 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LSM1O15116 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.17□□□□□ -1.74
LSM1O15116 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM1O15116 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM1O15116 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM1O15116 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.16□□□□□ -1.74
LSM1O15116 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM1O15116 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LSM1O15116 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LSM1O15116 AC008033.1-201ENST00000216407 1162 ntBASIC4.16□□□□□ -1.74
LSM1O15116 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.16□□□□□ -1.74
LSM1O15116 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
LSM1O15116 RPL31P52-201ENST00000407532 367 ntBASIC4.16□□□□□ -1.74
LSM1O15116 RHEBP3-201ENST00000411920 351 ntBASIC4.16□□□□□ -1.74
LSM1O15116 MTND4P11-201ENST00000417020 1058 ntBASIC4.16□□□□□ -1.74
LSM1O15116 TRGV6-201ENST00000417928 299 ntBASIC4.16□□□□□ -1.74
LSM1O15116 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM1O15116 HMGB1P32-201ENST00000425971 565 ntBASIC4.16□□□□□ -1.74
LSM1O15116 AL365396.1-201ENST00000430854 671 ntBASIC4.16□□□□□ -1.74
LSM1O15116 NDUFA5P10-201ENST00000432147 357 ntBASIC4.16□□□□□ -1.74
LSM1O15116 ELOCP8-201ENST00000439309 332 ntBASIC4.16□□□□□ -1.74
LSM1O15116 RPL12P3-201ENST00000440080 396 ntBASIC4.16□□□□□ -1.74
LSM1O15116 ELOCP15-201ENST00000442090 332 ntBASIC4.16□□□□□ -1.74
LSM1O15116 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.16□□□□□ -1.74
LSM1O15116 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM1O15116 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.16□□□□□ -1.74
LSM1O15116 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.16□□□□□ -1.74
LSM1O15116 AC083982.1-201ENST00000485679 344 ntBASIC4.16□□□□□ -1.74
LSM1O15116 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.16□□□□□ -1.74
LSM1O15116 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.16□□□□□ -1.74
LSM1O15116 KCTD9P2-201ENST00000512203 1013 ntBASIC4.16□□□□□ -1.74
LSM1O15116 RNU6-1308P-201ENST00000516817 103 ntBASIC4.16□□□□□ -1.74
LSM1O15116 AC104997.1-201ENST00000519761 717 ntBASIC4.16□□□□□ -1.74
LSM1O15116 OR7E10P-201ENST00000526420 991 ntBASIC4.16□□□□□ -1.74
LSM1O15116 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.16□□□□□ -1.74
LSM1O15116 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.16□□□□□ -1.74
LSM1O15116 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
LSM1O15116 AC008782.1-201ENST00000603386 430 ntBASIC4.16□□□□□ -1.74
LSM1O15116 AC115286.1-201ENST00000604298 434 ntBASIC4.16□□□□□ -1.74
LSM1O15116 AL391834.1-201ENST00000609609 560 ntBASIC4.16□□□□□ -1.74
LSM1O15116 AC139769.3-201ENST00000618383 175 ntBASIC4.16□□□□□ -1.74
LSM1O15116 ERCC6-202ENST00000374127 1782 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms