Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1AO00322 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 RNU1-18P-201ENST00000363062 164 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 RPS27AP11-201ENST00000402798 447 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 SNORA11B-201ENST00000408175 129 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 EIF4A1P3-201ENST00000411521 244 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.82□□□□□ -1.8
UPK1AO00322 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1AO00322 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1AO00322 NPM1P34-201ENST00000428821 893 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AC016712.1-201ENST00000431088 378 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AL358472.1-201ENST00000431295 329 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1AO00322 PPIAP17-201ENST00000438507 471 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1AO00322 VN1R25P-201ENST00000443385 738 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UPK1AO00322 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1AO00322 NUTF2P3-201ENST00000448540 384 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1AO00322 VN1R40P-201ENST00000455196 941 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 RPL7P1-201ENST00000468161 747 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 RPL7P9-201ENST00000468715 747 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AC105918.1-201ENST00000474399 838 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
UPK1AO00322 RN7SL604P-201ENST00000492589 296 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 RPL29P14-201ENST00000495837 428 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.82□□□□□ -1.8
UPK1AO00322 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1AO00322 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1AO00322 GNRHR2P1-201ENST00000555315 631 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AC012417.1-201ENST00000582307 1039 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 KPNA2P3-201ENST00000584190 848 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.82□□□□□ -1.8
UPK1AO00322 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1AO00322 AL139286.1-201ENST00000604465 483 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AL023583.1-201ENST00000607518 1143 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 AL445423.1-201ENST00000609941 536 ntBASIC3.82□□□□□ -1.8
UPK1AO00322 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1AO00322 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1AO00322 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
UPK1AO00322 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1AO00322 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1AO00322 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UPK1AO00322 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1AO00322 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.81□□□□□ -1.8
UPK1AO00322 RNU6-984P-201ENST00000363236 109 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 RN7SKP33-201ENST00000410942 340 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 MTND4LP13-201ENST00000425022 298 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 COX6CP15-201ENST00000426313 211 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.81□□□□□ -1.8
UPK1AO00322 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1AO00322 UBE2V2P1-201ENST00000434717 398 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.81□□□□□ -1.8
UPK1AO00322 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.81□□□□□ -1.8
UPK1AO00322 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1AO00322 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.81□□□□□ -1.8
UPK1AO00322 AC022431.1-201ENST00000450941 438 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.81□□□□□ -1.8
UPK1AO00322 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1AO00322 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1AO00322 AC022968.1-201ENST00000567372 442 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 AC023575.1-201ENST00000580510 358 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 RN7SL600P-201ENST00000581811 299 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 MIR5684-201ENST00000585074 65 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.81□□□□□ -1.8
UPK1AO00322 AC025946.2-201ENST00000603398 234 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 AC005962.2-201ENST00000611427 652 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 AC078899.5-201ENST00000612475 178 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 MLECP1-201ENST00000615893 709 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1AO00322 AC105105.5-201ENST00000622635 1294 ntBASIC3.81□□□□□ -1.8
UPK1AO00322 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UPK1AO00322 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.81□□□□□ -1.8
UPK1AO00322 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1AO00322 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
UPK1AO00322 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.8□□□□□ -1.8
UPK1AO00322 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPK1AO00322 AL356317.1-201ENST00000396110 1436 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 IPO8P1-201ENST00000455509 3109 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
UPK1AO00322 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
UPK1AO00322 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPK1AO00322 NCAPGP1-201ENST00000505112 1814 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 SNORD35B-201ENST00000363660 87 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
UPK1AO00322 RNU11-4P-201ENST00000391149 133 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.8□□□□□ -1.8
UPK1AO00322 KCTD9P3-201ENST00000434597 1169 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 FCF1P7-201ENST00000451185 558 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 RPL38P1-201ENST00000460914 211 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.8□□□□□ -1.8
UPK1AO00322 AC146944.2-203ENST00000502493 354 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
UPK1AO00322 AC083829.1-201ENST00000503756 657 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 AC139495.1-202ENST00000513164 354 ntBASIC3.8□□□□□ -1.8
UPK1AO00322 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.8□□□□□ -1.8
UPK1AO00322 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.8□□□□□ -1.8
UPK1AO00322 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms