Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm5538W4VSP6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Gm18421-201ENSMUST00000204122 625 ntBASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm5538W4VSP6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm5538W4VSP6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Gm18101-201ENSMUST00000215769 548 ntBASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Gm5538W4VSP6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.9■□□□□ 0.3
Gm5538W4VSP6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms