Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcb1Q9Z0H3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smarcb1Q9Z0H3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Gm27459-201ENSMUST00000184860 107 ntBASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Gm44454-201ENSMUST00000198541 138 ntBASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smarcb1Q9Z0H3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smarcb1Q9Z0H3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smarcb1Q9Z0H3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Gm43347-201ENSMUST00000200226 580 ntBASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcb1Q9Z0H3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcb1Q9Z0H3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms