Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcsQ9WU84 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcsQ9WU84 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CcsQ9WU84 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.93□□□□□ -0.34
CcsQ9WU84 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.93□□□□□ -0.34
CcsQ9WU84 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CcsQ9WU84 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.93□□□□□ -0.34
CcsQ9WU84 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Tgds-204ENSMUST00000228543 1594 ntBASIC12.93□□□□□ -0.34
CcsQ9WU84 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CcsQ9WU84 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CcsQ9WU84 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CcsQ9WU84 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CcsQ9WU84 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.92□□□□□ -0.34
CcsQ9WU84 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CcsQ9WU84 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CcsQ9WU84 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.92□□□□□ -0.34
CcsQ9WU84 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CcsQ9WU84 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CcsQ9WU84 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.91□□□□□ -0.34
CcsQ9WU84 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.91□□□□□ -0.34
CcsQ9WU84 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.91□□□□□ -0.34
CcsQ9WU84 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CcsQ9WU84 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.91□□□□□ -0.34
CcsQ9WU84 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.91□□□□□ -0.34
CcsQ9WU84 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.91□□□□□ -0.34
CcsQ9WU84 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Gm8520-201ENSMUST00000186517 868 ntBASIC12.91□□□□□ -0.34
CcsQ9WU84 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.91□□□□□ -0.34
CcsQ9WU84 Gm44549-201ENSMUST00000208351 577 ntBASIC12.91□□□□□ -0.34
CcsQ9WU84 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.91□□□□□ -0.34
CcsQ9WU84 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CcsQ9WU84 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.91□□□□□ -0.34
CcsQ9WU84 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CcsQ9WU84 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CcsQ9WU84 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms