Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col13a1Q9R1N9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Gm12644-201ENSMUST00000119935 606 ntBASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Gm6376-201ENSMUST00000209407 580 ntBASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Rps4l-201ENSMUST00000071745 943 ntBASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Idnk-204ENSMUST00000226010 1898 ntBASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col13a1Q9R1N9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Gm5364-201ENSMUST00000216789 889 ntBASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.06□□□□□ -0.16
Col13a1Q9R1N9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Gm6736-201ENSMUST00000166583 948 ntBASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Gm5264-201ENSMUST00000190584 848 ntBASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Gm29791-202ENSMUST00000207888 369 ntBASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col13a1Q9R1N9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Gm6296-201ENSMUST00000222599 943 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms