Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Gm7862-201ENSMUST00000121461 292 ntBASIC14.49□□□□□ -0.09
Nubp1Q9R060 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.49□□□□□ -0.09
Nubp1Q9R060 Gm38114-201ENSMUST00000191877 1232 ntBASIC14.49□□□□□ -0.09
Nubp1Q9R060 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.49□□□□□ -0.09
Nubp1Q9R060 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nubp1Q9R060 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Nubp1Q9R060 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Gm22885-201ENSMUST00000157410 107 ntBASIC14.48□□□□□ -0.09
Nubp1Q9R060 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Gm6376-201ENSMUST00000209407 580 ntBASIC14.48□□□□□ -0.09
Nubp1Q9R060 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Nubp1Q9R060 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nubp1Q9R060 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.47□□□□□ -0.09
Nubp1Q9R060 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Gm6736-201ENSMUST00000166583 948 ntBASIC14.47□□□□□ -0.09
Nubp1Q9R060 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Fst-202ENSMUST00000223640 2612 ntBASIC14.47□□□□□ -0.09
Nubp1Q9R060 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nubp1Q9R060 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.46□□□□□ -0.09
Nubp1Q9R060 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Gm7063-201ENSMUST00000186840 981 ntBASIC14.46□□□□□ -0.09
Nubp1Q9R060 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.46□□□□□ -0.09
Nubp1Q9R060 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nubp1Q9R060 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nubp1Q9R060 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nubp1Q9R060 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Nubp1Q9R060 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nubp1Q9R060 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Nubp1Q9R060 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nubp1Q9R060 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nubp1Q9R060 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nubp1Q9R060 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nubp1Q9R060 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms